RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 BAIAP2L1Q9UHR4 511 aa16.03■□□□□ 0.16
SNX1-203ENST00000558040 TAGLN3Q9UI15 199 aa16.03■□□□□ 0.16
SNX1-203ENST00000558040 UNC13CQ8NB66 2214 aa16.03■□□□□ 0.16
SNX1-203ENST00000558040 ASCC3Q8N3C0 2202 aaKnown RBP16.02■□□□□ 0.16
SNX1-203ENST00000558040 A0A0G2JN53 185 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 DYTNA2CJ06 578 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 HYKKA2RU49 373 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 FAM234BA2RU67 622 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 FITM1A5D6W6 292 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 TMX2-CTNND1H3BSU7 103 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 ANKRD28O15084 1053 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 B3GALT2O43825 422 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 DDX5P17844 614 aaKnown RBP16.02■□□□□ 0.16
SNX1-203ENST00000558040 TACR1P25103 407 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 RPL3P39023 403 aaKnown RBP16.02■□□□□ 0.16
SNX1-203ENST00000558040 POLR2JP52435 117 aaKnown RBP16.02■□□□□ 0.16
SNX1-203ENST00000558040 KCNK10P57789 538 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 C21orf58P58505 322 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 CYLC2Q14093 348 aaPredicted RBP16.02■□□□□ 0.16
SNX1-203ENST00000558040 DPY19L1Q2PZI1 675 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 FAM214AQ32MH5 1076 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 YOD1Q5VVQ6 348 aaPredicted RBP16.02■□□□□ 0.16
SNX1-203ENST00000558040 ACOT4Q8N9L9 421 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 AGBL5Q8NDL9 886 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 RCBTB1Q8NDN9 531 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 OR9I1Q8NGQ6 314 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 OR8K5Q8NH50 307 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 PROKR1Q8TCW9 393 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 C16orf78Q8WTQ4 265 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 TSPEARQ8WU66 669 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 NSL1Q96IY1 281 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 SLC25A23Q9BV35 468 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 STARD5Q9NSY2 213 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 TXLNGQ9NUQ3 528 aa16.02■□□□□ 0.16
SNX1-203ENST00000558040 WDFY4Q6ZS81 3184 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 C4orf51C9J302 202 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 NR5A2O00482 541 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 ATP5HO75947 161 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 SNRPB2P08579 225 aaKnown RBP16.01■□□□□ 0.15
SNX1-203ENST00000558040 FAM58BPP0C7Q3 252 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 ESRRAP11474 423 aaPredicted RBP16.01■□□□□ 0.15
SNX1-203ENST00000558040 COX4I1P13073 169 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 CALB2P22676 271 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 CERS1P27544 350 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 CCKBRP32239 447 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 MNAT1P51948 309 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 TAS2R50P59544 299 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 STX5Q13190 355 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 SLAMF1Q13291 335 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 FAM53BQ14153 422 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 MUM1Q2TAK8 710 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 DEFB134Q4QY38 66 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 ZNF793Q6ZN11 406 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 GK5Q6ZS86 529 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 R3HCC1LQ7Z5L2 792 aaKnown RBP16.01■□□□□ 0.15
SNX1-203ENST00000558040 BPHLQ86WA6 291 aaPredicted RBP16.01■□□□□ 0.15
SNX1-203ENST00000558040 SNX32Q86XE0 403 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 NETO1Q8TDF5 533 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 TESCQ96BS2 214 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 ZNF501Q96CX3 271 aaPredicted RBP16.01■□□□□ 0.15
SNX1-203ENST00000558040 PHOX2BQ99453 314 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 PRPF18Q99633 342 aaKnown RBP16.01■□□□□ 0.15
SNX1-203ENST00000558040 FAIM2Q9BWQ8 316 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 STRADBQ9C0K7 418 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 SPRTNQ9H040 489 aaPredicted RBP16.01■□□□□ 0.15
SNX1-203ENST00000558040 ACTL8Q9H568 366 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 CLMPQ9H6B4 373 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 ARL8BQ9NVJ2 186 aa16.01■□□□□ 0.15
SNX1-203ENST00000558040 BBIP1A8MTZ0 92 aa16■□□□□ 0.15
SNX1-203ENST00000558040 TMPRSS11DO60235 418 aa16■□□□□ 0.15
SNX1-203ENST00000558040 GALR3O60755 368 aaPredicted RBP16■□□□□ 0.15
SNX1-203ENST00000558040 HNRNPCL1O60812 293 aaKnown RBP16■□□□□ 0.15
SNX1-203ENST00000558040 LRATO95237 230 aa16■□□□□ 0.15
SNX1-203ENST00000558040 CBX6O95503 412 aa16■□□□□ 0.15
SNX1-203ENST00000558040 IL6P05231 212 aa16■□□□□ 0.15
SNX1-203ENST00000558040 CTSBP07858 339 aa16■□□□□ 0.15
SNX1-203ENST00000558040 ARSFP54793 590 aa16■□□□□ 0.15
SNX1-203ENST00000558040 KLC1Q07866 573 aa16■□□□□ 0.15
SNX1-203ENST00000558040 BNIP1Q12981 228 aa16■□□□□ 0.15
SNX1-203ENST00000558040 RCAN2Q14206 197 aa16■□□□□ 0.15
SNX1-203ENST00000558040 HEPACAMQ14CZ8 416 aa16■□□□□ 0.15
SNX1-203ENST00000558040 BLOC1S3Q6QNY0 202 aa16■□□□□ 0.15
SNX1-203ENST00000558040 DGLUCYQ7Z3D6 616 aa16■□□□□ 0.15
SNX1-203ENST00000558040 YTHDF3Q7Z739 585 aaKnown RBP16■□□□□ 0.15
SNX1-203ENST00000558040 B3GNT8Q7Z7M8 397 aa16■□□□□ 0.15
SNX1-203ENST00000558040 FUNDC1Q8IVP5 155 aa16■□□□□ 0.15
SNX1-203ENST00000558040 ARHGEF39Q8N4T4 335 aa16■□□□□ 0.15
SNX1-203ENST00000558040 DEFB124Q8NES8 71 aa16■□□□□ 0.15
SNX1-203ENST00000558040 OR1L3Q8NH93 324 aa16■□□□□ 0.15
SNX1-203ENST00000558040 MTERF3Q96E29 417 aa16■□□□□ 0.15
SNX1-203ENST00000558040 EGLN2Q96KS0 407 aa16■□□□□ 0.15
SNX1-203ENST00000558040 TEX37Q96LM6 180 aa16■□□□□ 0.15
SNX1-203ENST00000558040 C10orf90Q96M02 699 aa16■□□□□ 0.15
SNX1-203ENST00000558040 OR6C1Q96RD1 312 aa16■□□□□ 0.15
SNX1-203ENST00000558040 NDC1Q9BTX1 674 aa16■□□□□ 0.15
SNX1-203ENST00000558040 NPLQ9BXD5 320 aaPredicted RBP16■□□□□ 0.15
SNX1-203ENST00000558040 SIDT1Q9NXL6 827 aaKnown RBP16■□□□□ 0.15
SNX1-203ENST00000558040 PHF11Q9UIL8 331 aa16■□□□□ 0.15
SNX1-203ENST00000558040 RARRES3Q9UL19 164 aa16■□□□□ 0.15
SNX1-203ENST00000558040 NAALAD2Q9Y3Q0 740 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms