RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 RPTNQ6XPR3 784 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 SLCO4C1Q6ZQN7 724 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 GALNTL5Q7Z4T8 443 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 TICAM1Q8IUC6 712 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 KRT78Q8N1N4 520 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 THAP3Q8WTV1 239 aaPredicted RBP13.27□□□□□ -0.29
SNX6-210ENST00000557341 ITLN2Q8WWU7 325 aaPredicted RBP13.27□□□□□ -0.29
SNX6-210ENST00000557341 CCT6BQ92526 530 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 GPR137Q96N19 417 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 RBBP8Q99708 897 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 CPNE1Q99829 537 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 TMEM79Q9BSE2 394 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 CAPS2Q9BXY5 557 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 UNKQ9C0B0 810 aaKnown RBP13.27□□□□□ -0.29
SNX6-210ENST00000557341 PITHD1Q9GZP4 211 aaPredicted RBP13.27□□□□□ -0.29
SNX6-210ENST00000557341 AICDAQ9GZX7 198 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 DPH5Q9H2P9 285 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 CAB39LQ9H9S4 337 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 SAYSD1Q9NPB0 183 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 NECTIN3Q9NQS3 549 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 GPRC5BQ9NZH0 403 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 WHRNQ9P202 907 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 PYCARDQ9ULZ3 195 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 FCHO1O14526 889 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 FANCGO15287 622 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 ERI3O43414 337 aaKnown RBP13.26□□□□□ -0.29
SNX6-210ENST00000557341 SLC25A12O75746 678 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 WISP3O95389 354 aaPredicted RBP13.26□□□□□ -0.29
SNX6-210ENST00000557341 SP1P08047 785 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 CCDC166P0CW27 439 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 STMN1P16949 149 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 HNRNPH1P31943 449 aaKnown RBP13.26□□□□□ -0.29
SNX6-210ENST00000557341 CYB561P49447 251 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 ATP6V0D1P61421 351 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 BTN3A2P78410 334 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 ART3Q13508 389 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 TERF2Q15554 542 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 SLC25A25Q6KCM7 469 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 TRIM40Q6P9F5 258 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 MAATS1Q7Z4T9 603 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 ZNF808Q8N4W9 903 aaPredicted RBP13.26□□□□□ -0.29
SNX6-210ENST00000557341 ADAMTS18Q8TE60 1221 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 MARVELD3Q96A59 401 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 MS4A6EQ96DS6 147 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 PDLIM2Q96JY6 352 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 GPR22Q99680 433 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 ERP44Q9BS26 406 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 NPLQ9BXD5 320 aaPredicted RBP13.26□□□□□ -0.29
SNX6-210ENST00000557341 TSPAN10Q9H1Z9 355 aaPredicted RBP13.26□□□□□ -0.29
SNX6-210ENST00000557341 EHD1Q9H4M9 534 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 DNAJC11Q9NVH1 559 aa13.26□□□□□ -0.29
SNX6-210ENST00000557341 MTO1Q9Y2Z2 717 aaKnown RBP13.26□□□□□ -0.29
SNX6-210ENST00000557341 A0A0G2JN53 185 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 TCRBV9S1A1TA0A576 114 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 ARHGAP10A1A4S6 786 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 LRIT2A6NDA9 550 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 SYNDIG1LA6NDD5 238 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 ANKDD1BA6NHY2 528 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 CXorf49A8MYA2 514 aaPredicted RBP13.25□□□□□ -0.29
SNX6-210ENST00000557341 CLGNO14967 610 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 PHGDHO43175 533 aaKnown RBP13.25□□□□□ -0.29
SNX6-210ENST00000557341 NME2P1O60361 137 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 CLEC3AO75596 197 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 MYO1DO94832 1006 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 CD1DP15813 335 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 ZNF24P17028 368 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 NME2P22392 152 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 GGT5P36269 586 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 GP5P40197 560 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 RAB38P57729 211 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 MLF1P58340 268 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 MRPS25P82663 173 aaKnown RBP13.25□□□□□ -0.29
SNX6-210ENST00000557341 MAPKAPK3Q16644 382 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 KRTCAP3Q53RY4 240 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 CDKL4Q5MAI5 379 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 ZNF468Q5VIY5 522 aaPredicted RBP13.25□□□□□ -0.29
SNX6-210ENST00000557341 MRGPRGQ86SM5 289 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 GPSM1Q86YR5 675 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 SCUBE1Q8IWY4 988 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 SPATA6LQ8N4H0 392 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 PDPRQ8NCN5 879 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 NFAM1Q8NET5 270 aaPredicted RBP13.25□□□□□ -0.29
SNX6-210ENST00000557341 B3GNT7Q8NFL0 401 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 OR2L5Q8NG80 312 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 TMEM125Q96AQ2 219 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 DEFB126Q9BYW3 111 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 NT5DC2Q9H857 520 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 COPS7BQ9H9Q2 264 aaPredicted RBP13.25□□□□□ -0.29
SNX6-210ENST00000557341 TINAGQ9UJW2 476 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 MRPS33Q9Y291 106 aaKnown RBP13.25□□□□□ -0.29
SNX6-210ENST00000557341 KLF2Q9Y5W3 355 aaPredicted RBP13.25□□□□□ -0.29
SNX6-210ENST00000557341 CSMD1Q96PZ7 3565 aa13.25□□□□□ -0.29
SNX6-210ENST00000557341 PHF3Q92576 2039 aaKnown RBP13.24□□□□□ -0.29
SNX6-210ENST00000557341 TRBV11-1A0A0K0K1C0 115 aa13.24□□□□□ -0.29
SNX6-210ENST00000557341 FAM159BA6NKW6 160 aa13.24□□□□□ -0.29
SNX6-210ENST00000557341 A8MUA0 341 aa13.24□□□□□ -0.29
SNX6-210ENST00000557341 NPIPA5E9PKD4 350 aa13.24□□□□□ -0.29
SNX6-210ENST00000557341 CLDN4O14493 209 aa13.24□□□□□ -0.29
SNX6-210ENST00000557341 TAPBPO15533 448 aa13.24□□□□□ -0.29
SNX6-210ENST00000557341 RAD51CO43502 376 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms