RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 OLR1P78380 273 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 CLCQ05315 142 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 SLC18A2Q05940 514 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 NFATC3Q12968 1075 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 RUNX2Q13950 521 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 MINDY4Q4G0A6 757 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 LACTB2Q53H82 288 aaPredicted RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF678Q5SXM1 525 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 C10orf62Q5T681 223 aaPredicted RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 DEPDC1Q5TB30 811 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 KHDRBS2Q5VWX1 349 aaKnown RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 FAAH2Q6GMR7 532 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 ABHD17CQ6PCB6 329 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 ASB18Q6ZVZ8 466 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 HPS6Q86YV9 775 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 CA13Q8N1Q1 262 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 GALNT16Q8N428 558 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 OR52B6Q8NGF0 335 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 HUS1BQ8NHY5 278 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 PPP4R1Q8TF05 950 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF483Q8TF39 744 aaPredicted RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 NSUN5Q96P11 429 aaKnown RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 QRFPRQ96P65 431 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 KCNC2Q96PR1 638 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 SMAD5Q99717 465 aaKnown RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 TBCDQ9BTW9 1192 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 TMEM109Q9BVC6 243 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 MS4A8Q9BY19 250 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 VN1R1Q9GZP7 353 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 COPS7BQ9H9Q2 264 aaPredicted RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 SEMA4BQ9NPR2 832 aaPredicted RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF71Q9NQZ8 489 aaPredicted RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 GPR83Q9NYM4 423 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 C5AR2Q9P296 337 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 C19orf25Q9UFG5 118 aaPredicted RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 TP53TG5Q9Y2B4 290 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF451Q9Y4E5 1061 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 ATMQ13315 3056 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 SCN2AQ99250 2005 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 TNRC6AQ8NDV7 1962 aaKnown RBP10.07□□□□□ -0.8
LINC00239-201ENST00000556973 A0A0G2JN53 185 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 MAGEB17A8MXT2 336 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 PSMD12O00232 456 aaPredicted RBP10.07□□□□□ -0.8
LINC00239-201ENST00000556973 COPEO14579 308 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 MLYCDO95822 493 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 PROCP04070 461 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 MYL2P10916 166 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 COX6A1P12074 109 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 RNH1P13489 461 aaKnown RBP10.07□□□□□ -0.8
LINC00239-201ENST00000556973 ITGA3P26006 1051 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 EFNA3P52797 238 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 MTTPP55157 894 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 CDH13P55290 713 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 NAA20P61599 178 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 RHAGQ02094 409 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 DDX39BQ13838 428 aaKnown RBP10.07□□□□□ -0.8
LINC00239-201ENST00000556973 MYBPC3Q14896 1274 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 ZRSR2Q15696 482 aaKnown RBP10.07□□□□□ -0.8
LINC00239-201ENST00000556973 NSDHLQ15738 373 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 AP5B1Q2VPB7 878 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 GGTA1PQ4G0N0 100 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 UNC50Q53HI1 259 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 TTC19Q6DKK2 380 aaPredicted RBP10.07□□□□□ -0.8
LINC00239-201ENST00000556973 QSOX2Q6ZRP7 698 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 CPEB2Q7Z5Q1 589 aaKnown RBP10.07□□□□□ -0.8
LINC00239-201ENST00000556973 KBTBD2Q8IY47 623 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 SHISA5Q8N114 240 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 MYRIPQ8NFW9 859 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 OR4F6Q8NGB9 312 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 WDR20Q8TBZ3 569 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 RDH11Q8TC12 318 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 ADAMTS18Q8TE60 1221 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 RGMAQ96B86 450 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 C8orf44Q96CB5 159 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 L3HYPDHQ96EM0 354 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 CDK15Q96Q40 435 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 MTERF1Q99551 399 aaKnown RBP10.07□□□□□ -0.8
LINC00239-201ENST00000556973 CENPKQ9BS16 269 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 NUDT9Q9BW91 350 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF700Q9H0M5 742 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF160Q9HCG1 818 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 LANCL2Q9NS86 450 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 LGALS13Q9UHV8 139 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 EMCNQ9ULC0 261 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 PLAAQ9Y263 795 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 STK38LQ9Y2H1 464 aa10.07□□□□□ -0.8
LINC00239-201ENST00000556973 OR2W5A6NFC9 320 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 FAM227AF5H4B4 570 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 G3V2L1 256 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 K7EM74 188 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 MASP2O00187 686 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 CLDN4O14493 209 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 PLIN3O60664 434 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 PRMT3O60678 531 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 B4GALT2O60909 372 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 CDC123O75794 336 aaPredicted RBP10.06□□□□□ -0.8
LINC00239-201ENST00000556973 ALPPP05187 535 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 CPA3P15088 417 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 ATP5A1P25705 553 aaKnown RBP10.06□□□□□ -0.8
LINC00239-201ENST00000556973 LIM2P55344 173 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms