RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 GPN1Q9HCN4 374 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 ACSL6Q9UKU0 697 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 CLCA3PQ9Y6N3 262 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 ABHD14A-ACY1A0A1B0GW23 586 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 A8MU76 341 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 STC2O76061 302 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 CXCL14O95715 111 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 PRNPP04156 253 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 SP3Q02447 781 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 C22orf39Q6P5X5 142 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF783Q6ZMS7 281 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 RASSF6Q6ZTQ3 369 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 IQCHQ86VS3 1027 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 ACPTQ9BZG2 426 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 TNFRSF10DQ9UBN6 386 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 DPP7Q9UHL4 492 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 KIF13BQ9NQT8 1826 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 FAM170BA6NMN3 283 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 NDUFB5O43674 189 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 MPC1LP0DKB6 136 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 CD1EP15812 388 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 KELP23276 732 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 VIPR1P32241 457 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 PIGAP37287 484 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 GSTM4Q03013 218 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 NDUFA9Q16795 377 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 BRAT1Q6PJG6 821 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 SUSD1Q6UWL2 747 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 GHDCQ8N2G8 530 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 LINC00471Q8N535 108 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF655Q8N720 491 aaPredicted RBP14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 SNX33Q8WV41 574 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 SCAMP4Q969E2 229 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 TP63Q9H3D4 680 aaPredicted RBP14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 CDH7Q9ULB5 785 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 MRPS23Q9Y3D9 190 aaKnown RBP14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 PDE4DIPQ5VU43 2346 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 TRIM64CA6NLI5 447 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 DRGXA6NNA5 263 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 HLA-DQA2P01906 255 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 OMPP47874 163 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 FAM46CQ5VWP2 391 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 TMIGD1Q6UXZ0 262 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 Q6ZVL8 140 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 CHMP1BQ7LBR1 199 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 SERPINA11Q86U17 422 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 PGBD5Q8N414 524 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 NATD1Q8N6N6 113 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 DNASE1L2Q92874 299 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 NEUROD4Q9HD90 331 aa14.46□□□□□ -0.09
ARHGEF40-207ENST00000556399 SLC16A5O15375 505 aa14.46□□□□□ -0.1
ARHGEF40-207ENST00000556399 ARHGEF15O94989 841 aa14.46□□□□□ -0.1
ARHGEF40-207ENST00000556399 UBE2UQ5VVX9 321 aa14.46□□□□□ -0.1
ARHGEF40-207ENST00000556399 OR9Q2Q8NGE9 314 aa14.46□□□□□ -0.1
ARHGEF40-207ENST00000556399 OR8J1Q8NGP2 316 aa14.46□□□□□ -0.1
ARHGEF40-207ENST00000556399 SLC5A11Q8WWX8 675 aa14.46□□□□□ -0.1
ARHGEF40-207ENST00000556399 ARMC5Q96C12 935 aa14.46□□□□□ -0.1
ARHGEF40-207ENST00000556399 CCDC115Q96NT0 180 aa14.46□□□□□ -0.1
ARHGEF40-207ENST00000556399 PFDN2Q9UHV9 154 aa14.46□□□□□ -0.1
ARHGEF40-207ENST00000556399 STUB1Q9UNE7 303 aa14.46□□□□□ -0.1
ARHGEF40-207ENST00000556399 TARM1B6A8C7 271 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 CAPN5O15484 640 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 OR10H2O60403 315 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 OR6A2O95222 327 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 HSD3B1P14060 373 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 HSD3B2P26439 372 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 MAP2K3P46734 347 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 RGRP47804 291 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 RPL34P49207 117 aaKnown RBP14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 AGAP7PQ5VUJ5 663 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 NAGSQ8N159 534 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 SRFBP1Q8NEF9 429 aaKnown RBP14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 COMMD9Q9P000 198 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 ITM2BQ9Y287 266 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 URADA6NGE7 173 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 INMT-MINDY4F8WBC2 141 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 ZNF30P17039 623 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 RHCEP18577 417 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 RPS3P23396 243 aaKnown RBP eCLIP14.45□□□□□ -0.11e-6■■■■■ 35.9
ARHGEF40-207ENST00000556399 CNR2P34972 360 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 GATMP50440 423 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 GMFBP60983 142 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 MEDAGQ5VYS4 303 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 GINS4Q9BRT9 223 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 CHIAQ9BZP6 476 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 TMEM27Q9HBJ8 222 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 IL37Q9NZH6 218 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 M0R129 80 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 HMGN1P05114 100 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 PPM1AP35813 382 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 GGT2P36268 569 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 RGNQ15493 299 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 CPZQ66K79 652 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 LIN54Q6MZP7 749 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 ARL9Q6T311 187 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 SLC36A4Q6YBV0 504 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 MRPL10Q7Z7H8 261 aaKnown RBP14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 RANBP3LQ86VV4 465 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 EPYCQ99645 322 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 IFT27Q9BW83 186 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms