RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ZNF773Q6PK81 442 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 SMARCD3Q6STE5 483 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 GTF2IRD2Q86UP8 949 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 IQCHQ86VS3 1027 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 ZNF101Q8IZC7 436 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 UGT1A7Q9HAW7 530 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 UGT1A10Q9HAW8 530 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 UGT1A8Q9HAW9 530 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 ABCB9Q9NP78 766 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 TAS2R8Q9NYW2 309 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 CENPBD1B2RD01 187 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 ENPP3O14638 875 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 FLRT2O43155 660 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 CLDN7O95471 211 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 RPS3P23396 243 aaKnown RBP eCLIP10.35□□□□□ -0.751e-7■■■□□ 15
ACTN1-216ENST00000556083 RAB33AQ14088 237 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 GRM7Q14831 915 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 UPP1Q16831 310 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 LY6G5CQ5SRR4 150 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 MPP7Q5T2T1 576 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 PHF19Q5T6S3 580 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 ARHGAP11AQ6P4F7 1023 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 ZC3H14Q6PJT7 736 aaKnown RBP10.35□□□□□ -0.75
ACTN1-216ENST00000556083 TICAM1Q8IUC6 712 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 TMBIM1Q969X1 311 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 FEM1AQ9BSK4 669 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 CENPOQ9BU64 300 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 TSSK6Q9BXA6 273 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 POTEKPQ9BYX7 375 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 TRPV4Q9HBA0 871 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 GALPQ9UBC7 116 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 CNOT11Q9UKZ1 510 aaKnown RBP10.35□□□□□ -0.75
ACTN1-216ENST00000556083 MRPL42Q9Y6G3 142 aaKnown RBP10.35□□□□□ -0.75
ACTN1-216ENST00000556083 MON2Q7Z3U7 1717 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 OR2AT4A6NND4 320 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 ETV6P41212 452 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 SLC6A9P48067 706 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 HSD17B7P56937 341 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 MAB21L1Q13394 359 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 CMTM8Q8IZV2 173 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 PHOSPHO1Q8TCT1 267 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 POF1BQ8WVV4 589 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 NANOS1Q8WY41 292 aaKnown RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 TM9SF2Q99805 663 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 MEPEQ9NQ76 525 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 ZFR2Q9UPR6 939 aaKnown RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 TTC24A2A3L6 582 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 S1PR4O95977 384 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 FMO3P31513 532 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 PSPHP78330 225 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 ACY1Q03154 408 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 MZT1Q08AG7 82 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 MOGQ16653 247 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 UGT3A2Q3SY77 523 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 AMZ1Q400G9 498 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 ALG10BQ5I7T1 473 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 SLC27A4Q6P1M0 643 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 DCDC5Q6ZRR9 648 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 SLC25A36Q96CQ1 311 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 MSANTD3Q96H12 275 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 SCLYQ96I15 445 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 GMLQ99445 158 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 DCSTAMPQ9H295 470 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 CENPMQ9NSP4 180 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 PAK1IP1Q9NWT1 392 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 SALL4Q9UJQ4 1053 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 PCDHB14Q9Y5E9 798 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 EIF1AYO14602 144 aaKnown RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 LATO43561 262 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 ONECUT3O60422 494 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 NOS1APO75052 506 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 ITGA3P26006 1051 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 RABIFP47224 123 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 EIF1AXP47813 144 aaKnown RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 CREB5Q02930 508 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 LRP8Q14114 963 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 ELOAQ14241 798 aaKnown RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 TEAD2Q15562 447 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 CNPY1Q3B7I2 92 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 CYBRD1Q53TN4 286 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 ZNF782Q6ZMW2 699 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 OR8H1Q8NGG4 311 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 LMX1AQ8TE12 382 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 TRIB2Q92519 343 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 TCEAL3Q969E4 200 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 MCHR1Q99705 422 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 DEFB126Q9BYW3 111 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 SLC6A15Q9H2J7 730 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 SNTG1Q9NSN8 517 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 DLGAP4Q9Y2H0 992 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 A0A0U1RQJ8 604 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 IQCMA0A1B0GVH7 501 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 ZNF878C9JN71 531 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 TMEM189-UBE2V1I3L0A0 370 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 ACOT7O00154 380 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 HSPA12AO43301 675 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 INMTO95050 263 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms