RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	CERS1	P27544	350 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	EPHA3	P29320	983 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	SLC5A2	P31639	672 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	MAPK12	P53778	367 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	TBL3	Q12788	808 aa	Known RBP	11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	DSG2	Q14126	1118 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	SLC9A5	Q14940	896 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	RTP5	Q14D33	572 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	VWA5B1	Q5TIE3	1220 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	ZFAND4	Q86XD8	727 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	PARP9	Q8IXQ6	854 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	ARHGEF39	Q8N4T4	335 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	ACOT4	Q8N9L9	421 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	OR2T11	Q8NH01	316 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	ADAMTS18	Q8TE60	1221 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	CHTF18	Q8WVB6	975 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	PMEPA1	Q969W9	287 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	THOC1	Q96FV9	657 aa	Known RBP	11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	RILP	Q96NA2	401 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	LRFN5	Q96NI6	719 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	YIPF2	Q9BWQ6	316 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	AKTIP	Q9H8T0	292 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	CLK4	Q9HAZ1	481 aa	Known RBP	11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	TCF7L2	Q9NQB0	619 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	LYAR	Q9NX58	379 aa	Known RBP	11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	IFT80	Q9P2H3	777 aa	Predicted RBP	11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	GPN3	Q9UHW5	284 aa	Predicted RBP	11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	PHF11	Q9UIL8	331 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	EIF3L	Q9Y262	564 aa	Known RBP	11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	MRPS2	Q9Y399	296 aa	Known RBP	11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	CCL27	Q9Y4X3	112 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	PCM1	Q15154	2024 aa		11.87	□□□□□ -0.51
ABCD4-223	ENST00000555904	PIEZO1	Q92508	2521 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	GOLGA8Q	A0A0J9YX86	632 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	GOLGA8O	A6NCC3	632 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	ZNF860	A6NHJ4	632 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	NPIPB8	E9PQR5	432 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	GOLGA8N	F8WBI6	632 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	SGK494	L7N484	410 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	MEN1	O00255	615 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	RDH16	O75452	317 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	DXO	O77932	396 aa	Known RBP	11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	SCEL	O95171	688 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	ANXA4	P09525	319 aa	Predicted RBP	11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	SMIM10L1	P0DMW3	83 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	ZNF28	P17035	718 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	LBP	P18428	481 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	ATP5A1	P25705	553 aa	Known RBP	11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	TIA1	P31483	386 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	BSG	P35613	385 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	GSTM5	P46439	218 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	GCGR	P47871	477 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	SEC24C	P53992	1094 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	ERVK-8	P63133	956 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	SLAMF1	Q13291	335 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	SMU1	Q2TAY7	513 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	NKAIN1	Q4KMZ8	207 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	C6orf136	Q5SQH8	315 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	EPGN	Q6UW88	154 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904		Q6ZSR9	355 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	MAVS	Q7Z434	540 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	UBE3D	Q7Z6J8	389 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	PDSS2	Q86YH6	399 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	FAM9C	Q8IZT9	166 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	ESX1	Q8N693	406 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	GALNT6	Q8NCL4	622 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	CEP70	Q8NHQ1	597 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	ACTRT2	Q8TDY3	377 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	MR1	Q95460	341 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	APIP	Q96GX9	242 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	SMIM10	Q96HG1	83 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	C3orf30	Q96M34	536 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	GBP5	Q96PP8	586 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	SORBS1	Q9BX66	1292 aa	Known RBP	11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	NPL	Q9BXD5	320 aa	Predicted RBP	11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	EPN3	Q9H201	632 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	DDX31	Q9H8H2	851 aa	Known RBP	11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	PRDM7	Q9NQW5	492 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	MS4A12	Q9NXJ0	267 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	NOP53	Q9NZM5	478 aa	Known RBP	11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	FOXJ2	Q9P0K8	574 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	KLHL14	Q9P2G3	628 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	TRPC4	Q9UBN4	977 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	MCM8	Q9UJA3	840 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	TRIM33	Q9UPN9	1127 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	MAP4K5	Q9Y4K4	846 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	MAU2	Q9Y6X3	613 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	PCNX2	A6NKB5	2137 aa		11.86	□□□□□ -0.51
ABCD4-223	ENST00000555904	SPEG	Q15772	3267 aa		11.85	□□□□□ -0.51
ABCD4-223	ENST00000555904		A0A0A6YYD5	115 aa		11.85	□□□□□ -0.51
ABCD4-223	ENST00000555904	TRABD2B	A6NFA1	517 aa		11.85	□□□□□ -0.51
ABCD4-223	ENST00000555904	SRRM3	A6NNA2	597 aa	Predicted RBP	11.85	□□□□□ -0.51
ABCD4-223	ENST00000555904	CDRT15L2	A8MXV6	281 aa		11.85	□□□□□ -0.51
ABCD4-223	ENST00000555904	C4orf51	C9J302	202 aa		11.85	□□□□□ -0.51
ABCD4-223	ENST00000555904	SDHD	O14521	159 aa		11.85	□□□□□ -0.51
ABCD4-223	ENST00000555904	FOXS1	O43638	330 aa		11.85	□□□□□ -0.51

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