RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SMYD1Q8NB12 490 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 CADM4Q8NFZ8 388 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 PJA1Q8NG27 643 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 NETO1Q8TDF5 533 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 UCN3Q969E3 161 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 SLC35B4Q969S0 331 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 SMIM10Q96HG1 83 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 LRGUKQ96M69 825 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 QRFPRQ96P65 431 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 SLC29A1Q99808 456 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 ARPC5LQ9BPX5 153 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 LRRC61Q9BV99 259 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 SPATA9Q9BWV2 254 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 ABCG4Q9H172 646 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 PIF1Q9H611 641 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 POT1Q9NUX5 634 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 APOBEC3BQ9UH17 382 aaKnown RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 UTS2RQ9UKP6 389 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 DTNAQ9Y4J8 743 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 FAM221BA6H8Z2 402 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 TMEM221A6NGB7 291 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 CLIC1O00299 241 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 CXCR6O00574 342 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 SOCS2O14508 198 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 PPM1DO15297 605 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 CAPN5O15484 640 aaPredicted RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 TNFRSF21O75509 655 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 CCNDBP1O95273 360 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 THEGLP0DJG4 465 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 FOSL2P15408 326 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 ENGP17813 658 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 ACTR1BP42025 376 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 LSSP48449 732 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 ACTR1AP61163 376 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 RELAQ04206 551 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 MLC1Q15049 377 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 CEBPEQ15744 281 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 IQCCQ4KMZ1 466 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 AASDHQ4L235 1098 aaPredicted RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 PPP4R4Q6NUP7 873 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 C17orf82Q86X59 251 aaPredicted RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 TTLQ8NG68 377 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 MAGIXQ9H6Y5 334 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 SIRT3Q9NTG7 399 aaPredicted RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 ANKMY1Q9P2S6 941 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 MOSPD1Q9UJG1 213 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 ANAPC2Q9UJX6 822 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 ASB4Q9Y574 426 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 THADAQ6YHU6 1953 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 ANKDD1BA6NHY2 528 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 RTCAO00442 366 aaKnown RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 OR1F1O43749 312 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 B4GALT2O60909 372 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 CREG1O75629 220 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 UGT2B7P16662 529 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 PSMA4P25789 261 aaKnown RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 RPL3P39023 403 aaKnown RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 CYP4F2P78329 520 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 KIR2DS3Q14952 304 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 C16orf72Q14CZ0 275 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 CYP51A1Q16850 503 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 LRRC36Q1X8D7 754 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 TMEM35AQ53FP2 167 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 TBCELQ5QJ74 424 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 OR4C11Q6IEV9 310 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 R3HCC1LQ7Z5L2 792 aaKnown RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 IQCHQ86VS3 1027 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 IFNEQ86WN2 208 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 PLD3Q8IV08 490 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 CATSPER1Q8NEC5 780 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 TNIP2Q8NFZ5 429 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 PATE1Q8WXA2 126 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 RLN3Q8WXF3 142 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 GBP5Q96PP8 586 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 PANX1Q96RD7 426 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 DPH7Q9BTV6 452 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 TPSD1Q9BZJ3 242 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 SEMA6AQ9H2E6 1030 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 VCX3BQ9H321 246 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 COQ10BQ9H8M1 238 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 TAS2R7Q9NYW3 318 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 DLGAP2Q9P1A6 1054 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 RAB26Q9ULW5 256 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 INVSQ9Y283 1065 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 TRIOO75962 3097 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 GNG14A0A1W2PPG7 69 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 FAM170BA6NMN3 283 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 NAT1P18440 290 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 CD27P26842 260 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 TSFMP43897 325 aaKnown RBP8.47□□□□□ -1.05
TDP1-210ENST00000554976 RGNQ15493 299 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 SLC5A12Q1EHB4 618 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 PRRT3Q5FWE3 981 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 IRGCQ6NXR0 463 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 FBXO42Q6P3S6 717 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 ABHD17CQ6PCB6 329 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 CCDC80Q76M96 950 aa8.47□□□□□ -1.05
TDP1-210ENST00000554976 RNF44Q7L0R7 432 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms