RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 DCAF10Q5QP82 559 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 MFSD4BQ5TF39 518 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 LIPJQ5W064 366 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 HIST2H2AA3Q6FI13 130 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 ZYG11AQ6WRX3 759 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 PTRH1Q86Y79 214 aaKnown RBP11.65□□□□□ -0.54
SYNE2-214ENST00000554928 SRRM1Q8IYB3 904 aaKnown RBP11.65□□□□□ -0.54
SYNE2-214ENST00000554928 ZNF843Q8N446 348 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 FDCSPQ8NFU4 85 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 TTLQ8NG68 377 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 OR2L5Q8NG80 312 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 WDR20Q8TBZ3 569 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 ZIM3Q96PE6 472 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 CSF3RQ99062 836 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 NUDT9Q9BW91 350 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 ERVK-6Q9BXR3 956 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 PRDM7Q9NQW5 492 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 FARSBQ9NSD9 589 aaKnown RBP11.65□□□□□ -0.54
SYNE2-214ENST00000554928 DCDC2Q9UHG0 476 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 TMCO1Q9UM00 188 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 TP53TG5Q9Y2B4 290 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 KALRNO60229 2985 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 MAGEB17A8MXT2 336 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 H0YIV9 168 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 TGFBR3LH3BV60 316 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 PEX12O00623 359 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 COPEO14579 308 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 CEACAM4O75871 244 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 SUPT7LO94864 414 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 OR4F21O95013 312 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 CLDN9O95484 217 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 FHP07954 510 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 TAC1P20366 129 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 ARL1P40616 181 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-214ENST00000554928 CCNG1P51959 295 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 STXBP1P61764 594 aaKnown RBP11.64□□□□□ -0.55
SYNE2-214ENST00000554928 CLCQ05315 142 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 NFATC3Q12968 1075 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 PCOLCEQ15113 449 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 SGO1Q5FBB7 561 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 METTL2BQ6P1Q9 378 aaKnown RBP11.64□□□□□ -0.55
SYNE2-214ENST00000554928 TMEM205Q6UW68 189 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 LCA5Q86VQ0 697 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 PARP9Q8IXQ6 854 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 IQCKQ8N0W5 287 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 BANPQ8N9N5 519 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 ATP6V1E2Q96A05 226 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 TBC1D20Q96BZ9 403 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 HBEGFQ99075 208 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 WDR77Q9BQA1 342 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-214ENST00000554928 NTMT1Q9BV86 223 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 TMEM109Q9BVC6 243 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 ZNF717Q9BY31 904 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-214ENST00000554928 ROPN1BQ9BZX4 212 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-214ENST00000554928 GSTO2Q9H4Y5 243 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 ROPN1Q9HAT0 212 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-214ENST00000554928 ZBTB20Q9HC78 741 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-214ENST00000554928 ZNF160Q9HCG1 818 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 TNFRSF12AQ9NP84 129 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 SLC17A7Q9P2U7 560 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 CLDN16Q9Y5I7 305 aa11.64□□□□□ -0.55
SYNE2-214ENST00000554928 LOC102723996A0A087X1L8 192 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 IGHV1-45A0A0A0MS14 117 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 MYOCOSA0A1B0GUC4 107 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 URADA6NGE7 173 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 PLPP1O14494 284 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 UBFD1O14562 309 aaKnown RBP11.63□□□□□ -0.55
SYNE2-214ENST00000554928 UGDHO60701 494 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 IGHEP01854 428 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 MYL2P10916 166 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 ACPPP15309 386 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 IMPDH1P20839 514 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 MAOAP21397 527 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 ATP5A1P25705 553 aaKnown RBP11.63□□□□□ -0.55
SYNE2-214ENST00000554928 GSTM2P28161 218 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 HTR6P50406 440 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 PCLAFQ15004 111 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 KRT71Q3SY84 523 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 TUBB8Q3ZCM7 444 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 DEPDC1Q5TB30 811 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 KHDRBS2Q5VWX1 349 aaKnown RBP11.63□□□□□ -0.55
SYNE2-214ENST00000554928 MED25Q71SY5 747 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 MILR1Q7Z6M3 343 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 ANKRD37Q7Z713 158 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 RIBC1Q8N443 379 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-214ENST00000554928 CCNYL1Q8N7R7 359 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 TMEM102Q8N9M5 508 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-214ENST00000554928 FAM47BQ8NA70 645 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 LSM14AQ8ND56 463 aaKnown RBP11.63□□□□□ -0.55
SYNE2-214ENST00000554928 ARMC2Q8NEN0 867 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 C9orf43Q8TAL5 461 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-214ENST00000554928 UBE2E3Q969T4 207 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 L3HYPDHQ96EM0 354 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 APOPT1Q96IL0 206 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 SEC16BQ96JE7 1060 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 KCNA7Q96RP8 456 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 MAPKAP1Q9BPZ7 522 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 SLC25A18Q9H1K4 315 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 ADNPQ9H2P0 1102 aa11.63□□□□□ -0.55
SYNE2-214ENST00000554928 PRM3Q9NNZ6 103 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms