RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SIRT5Q9NXA8 310 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 SLC25A37Q9NYZ2 338 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 RNF181Q9P0P0 153 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 NDRG2Q9UN36 371 aaKnown RBP15.06■□□□□ 0
SYNE3-203ENST00000554873 SCML2Q9UQR0 700 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 A0A1W2PQL4 384 aaPredicted RBP15.06■□□□□ 0
SYNE3-203ENST00000554873 hCG_1807616A0A1W2PRN6 198 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 GMDSO60547 372 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 NDUFS3O75489 264 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 AKT1P31749 480 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 CSTF3Q12996 717 aaKnown RBP15.06■□□□□ 0
SYNE3-203ENST00000554873 KIAA0040Q15053 153 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 PTPRNQ16849 979 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 FAM110CQ1W6H9 321 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 MSRB3Q8IXL7 192 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 OR4K2Q8NGD2 314 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 OR52B6Q8NGF0 335 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 OR56A4Q8NGH8 313 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 SLC9A6Q92581 669 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 C12orf57Q99622 126 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 GSX2Q9BZM3 304 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 RAD18Q9NS91 495 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 LYARQ9NX58 379 aaKnown RBP15.06■□□□□ 0
SYNE3-203ENST00000554873 TAS2R16Q9NYV7 291 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 EIF2B4Q9UI10 523 aaKnown RBP15.06■□□□□ 0
SYNE3-203ENST00000554873 CACNG2Q9Y698 323 aa15.06■□□□□ 0
SYNE3-203ENST00000554873 TUBAL3A6NHL2 446 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 ZNF670-ZNF695F2Z2N8 137 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 INMT-MINDY4F8WBC2 141 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 ARVCFO00192 962 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 LYRM1O43325 122 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 PLOD3O60568 738 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 HMBSP08397 361 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 SLC10A3P09131 477 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 OR1E1P30953 314 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 MAN2A2P49641 1150 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 COX10Q12887 443 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 ZNF235Q14590 738 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 MAPKAPK3Q16644 382 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 DUSP6Q16828 381 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 Q6ZPB1 254 aaPredicted RBP15.05■□□□□ 0
SYNE3-203ENST00000554873 LRRC17Q8N6Y2 441 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 RAET1EQ8TD07 263 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 SUSD3Q96L08 255 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 SMIM14Q96QK8 99 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 RBP7Q96R05 134 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 FOLH1BQ9HBA9 442 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 NLE1Q9NVX2 485 aaPredicted RBP15.05■□□□□ 0
SYNE3-203ENST00000554873 CPA4Q9UI42 421 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 BAIAP2Q9UQB8 552 aa15.05■□□□□ 0
SYNE3-203ENST00000554873 MYO16Q9Y6X6 1858 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 A0A1W2PPL8 197 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 DRGXA6NNA5 263 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 GFRA2O00451 464 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 E2F3O00716 465 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 PRAMEF11O60813 436 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 ZNF682O95780 498 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 CYP17A1P05093 508 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 SLC2A2P11168 524 aaPredicted RBP15.05■□□□□ -0
SYNE3-203ENST00000554873 LHCGRP22888 699 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 SSTR4P31391 388 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 TGM4P49221 684 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 ERVFC1P60507 584 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 ERVPABLB-1P60509 514 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 TUSC3Q13454 348 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 ZNF169Q14929 603 aaPredicted RBP15.05■□□□□ -0
SYNE3-203ENST00000554873 EIF3MQ7L2H7 374 aaKnown RBP15.05■□□□□ -0
SYNE3-203ENST00000554873 DDX53Q86TM3 631 aaKnown RBP15.05■□□□□ -0
SYNE3-203ENST00000554873 CALHM3Q86XJ0 350 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 MIB1Q86YT6 1006 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 ZZZ3Q8IYH5 903 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 PHACTR4Q8IZ21 702 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 SRFBP1Q8NEF9 429 aaKnown RBP15.05■□□□□ -0
SYNE3-203ENST00000554873 CREB3L4Q8TEY5 395 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 SMG7Q92540 1137 aaKnown RBP15.05■□□□□ -0
SYNE3-203ENST00000554873 FAM120BQ96EK7 910 aaKnown RBP15.05■□□□□ -0
SYNE3-203ENST00000554873 WBP1Q96G27 269 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 KCNC2Q96PR1 638 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 TRIB3Q96RU7 358 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 HBEGFQ99075 208 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 CD244Q9BZW8 370 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 ZNF408Q9H9D4 720 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 SESN1Q9Y6P5 492 aa15.05■□□□□ -0
SYNE3-203ENST00000554873 CHP2O43745 196 aa15.04■□□□□ -0
SYNE3-203ENST00000554873 DIRAS1O95057 198 aa15.04■□□□□ -0
SYNE3-203ENST00000554873 LDOC1O95751 146 aaPredicted RBP15.04■□□□□ -0
SYNE3-203ENST00000554873 LGI1O95970 557 aa15.04■□□□□ -0
SYNE3-203ENST00000554873 ZNF140P52738 457 aaPredicted RBP15.04■□□□□ -0
SYNE3-203ENST00000554873 HSF2Q03933 536 aa15.04■□□□□ -0
SYNE3-203ENST00000554873 RTL4Q6ZR62 310 aa15.04■□□□□ -0
SYNE3-203ENST00000554873 NKAPQ8N5F7 415 aaKnown RBP15.04■□□□□ -0
SYNE3-203ENST00000554873 SIDT2Q8NBJ9 832 aaKnown RBP15.04■□□□□ -0
SYNE3-203ENST00000554873 EEF1AKMT1Q8WVE0 214 aa15.04■□□□□ -0
SYNE3-203ENST00000554873 ZBTB18Q99592 522 aa15.04■□□□□ -0
SYNE3-203ENST00000554873 REEP1Q9H902 201 aa15.04■□□□□ -0
SYNE3-203ENST00000554873 EMC7Q9NPA0 242 aa15.04■□□□□ -0
SYNE3-203ENST00000554873 HPF1Q9NWY4 346 aa15.04■□□□□ -0
SYNE3-203ENST00000554873 THUMPD1Q9NXG2 353 aaKnown RBP15.04■□□□□ -0
SYNE3-203ENST00000554873 ADAM30Q9UKF2 790 aa15.04■□□□□ -0
SYNE3-203ENST00000554873 LIPT1Q9Y234 373 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms