RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LEPRP48357 1165 aaKnown RBP2.7□□□□□ -1.98
SCFD1-213ENST00000554776 BPIFB3P59826 476 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 RPP38P78345 283 aaKnown RBP2.7□□□□□ -1.98
SCFD1-213ENST00000554776 IL1RL1Q01638 556 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 SLC3A1Q07837 685 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 WASHC5Q12768 1159 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 CEACAM7Q14002 265 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 MTF1Q14872 753 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 PDK1Q15118 436 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 FGD3Q5JSP0 725 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 SLC27A4Q6P1M0 643 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 CNSTQ6PJW8 725 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 TMEM64Q6YI46 380 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 Q6ZSR9 355 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 C1orf186Q6ZWK4 172 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 KRTAP7-1Q8IUC3 87 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 STHQ8IWL8 128 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 FAM89BQ8N5H3 189 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 ADAD2Q8NCV1 583 aaKnown RBP2.7□□□□□ -1.98
SCFD1-213ENST00000554776 CCNYQ8ND76 341 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 TRPV3Q8NET8 790 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 CD99L2Q8TCZ2 262 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 SMPDL3AQ92484 453 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 PRCCQ92733 491 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-213ENST00000554776 HAS2Q92819 552 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 SLC35C1Q96A29 364 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 CXorf58Q96LI9 332 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 NKX3-1Q99801 234 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-213ENST00000554776 UBAC1Q9BSL1 405 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 NAPBQ9H115 298 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 ABCG4Q9H172 646 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 ABCG8Q9H221 673 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 TNMDQ9H2S6 317 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 MAGEF1Q9HAY2 307 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 GPN1Q9HCN4 374 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-213ENST00000554776 KCNMB3Q9NPA1 279 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 ANO10Q9NW15 660 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 COMMD8Q9NX08 183 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 RNF186Q9NXI6 227 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 FBXL4Q9UKA2 621 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 PILRAQ9UKJ1 303 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 ODF2LQ9ULJ1 636 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 WDR37Q9Y2I8 494 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 RPH3AQ9Y2J0 694 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-213ENST00000554776 MRPS28Q9Y2Q9 187 aaKnown RBP2.7□□□□□ -1.98
SCFD1-213ENST00000554776 ETV7Q9Y603 341 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 A0A087WW49 117 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 FAM149AA5PLN7 773 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 SLC15A5A6NIM6 579 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 ECE2O60344 883 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 ATP6V1G1O75348 118 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 STAM2O75886 525 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF883P0CG24 379 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF26P17031 533 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-213ENST00000554776 TYMPP19971 482 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 CTNNA2P26232 953 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 OPRL1P41146 370 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 RABIFP47224 123 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 OR3A3P47888 321 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 PAX9P55771 341 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 HUNKP57058 714 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 SRP54P61011 504 aaKnown RBP2.69□□□□□ -1.98
SCFD1-213ENST00000554776 CNTN1Q12860 1018 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 SGCGQ13326 291 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 GIT2Q14161 759 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 KRT31Q15323 416 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 STXBP2Q15833 593 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 TAF1BQ53T94 588 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-213ENST00000554776 ADAMTSL4-AS1Q5T5F5 129 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 ATP1A1-AS1Q5TC04 95 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 LYPLAL1Q5VWZ2 237 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 PRAMEF7Q5VXH5 474 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 PWWP2BQ6NUJ5 590 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 PSRC1Q6PGN9 363 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-213ENST00000554776 FBXW8Q8N3Y1 598 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 MARVELD2Q8N4S9 558 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 RAB42Q8N4Z0 105 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 TEX26Q8N6G2 289 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 DDHD1Q8NEL9 900 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 OR5AP2Q8NGF4 316 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 OR13C5Q8NGS8 318 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 OR6S1Q8NH40 331 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 GPR148Q8TDV2 347 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 UBTD2Q8WUN7 234 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 ULK4Q96C45 1275 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 WBP1Q96G27 269 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 CFAP36Q96G28 342 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF274Q96GC6 653 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-213ENST00000554776 MAGED4Q96JG8 741 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 CDHR1Q96JP9 859 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 RUFY1Q96T51 708 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 FUCA2Q9BTY2 467 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 XPO4Q9C0E2 1151 aaKnown RBP2.69□□□□□ -1.98
SCFD1-213ENST00000554776 WWTR1Q9GZV5 400 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 CARD9Q9H257 536 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF665Q9H7R5 613 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 NINJ2Q9NZG7 142 aa2.69□□□□□ -1.98
SCFD1-213ENST00000554776 TRMT6Q9UJA5 497 aaKnown RBP2.69□□□□□ -1.98
SCFD1-213ENST00000554776 ELF5Q9UKW6 265 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-213ENST00000554776 EXOC7Q9UPT5 735 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms