RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 RUNX2Q13950 521 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 ZRSR2Q15696 482 aaKnown RBP12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 CCDC153Q494R4 210 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 MINDY4Q4G0A6 757 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 DEPDC1Q5TB30 811 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 KHDRBS2Q5VWX1 349 aaKnown RBP12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 FAAH2Q6GMR7 532 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 TCTN3Q6NUS6 607 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 ZYG11AQ6WRX3 759 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 CHSY3Q70JA7 882 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 MILR1Q7Z6M3 343 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 SLC22A9Q8IVM8 553 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 CA13Q8N1Q1 262 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 RNF175Q8N4F7 328 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 BANPQ8N9N5 519 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 CLEC1AQ8NC01 280 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 PLPP5Q8NEB5 264 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 C9orf43Q8TAL5 461 aaPredicted RBP12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 WDR20Q8TBZ3 569 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 TRPC4APQ8TEL6 797 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 REPS1Q96D71 796 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 L3HYPDHQ96EM0 354 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 CMTM7Q96FZ5 175 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 TMEM237Q96Q45 408 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 MTERF1Q99551 399 aaKnown RBP12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 NPLQ9BXD5 320 aaPredicted RBP12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 OR51B5Q9H339 312 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 C12orf65Q9H3J6 166 aaKnown RBP12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 ATP13A2Q9NQ11 1180 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 DMRT3Q9NQL9 472 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 PSD3Q9NYI0 1048 aa12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 PCDHGA9Q9Y5G4 932 aaKnown RBP12.18□□□□□ -0.46
MTHFD1-208ENST00000554739 A6NL46 340 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 EIF4E1BA6NMX2 242 aaKnown RBP12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 MAGEB17A8MXT2 336 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 FAM227AF5H4B4 570 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 FOXE1O00358 373 aaPredicted RBP12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 SH3BGRLO75368 114 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 SUPT7LO94864 414 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 OTCP00480 354 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 C8orf89P0DMQ9 161 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 COX6A1P12074 109 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 PTX3P26022 381 aaPredicted RBP12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 NEK2P51955 445 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 RHAGQ02094 409 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 CLCQ05315 142 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 TGM3Q08188 693 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 DDX39BQ13838 428 aaKnown RBP12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 TUBB8Q3ZCM7 444 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 GGTA1PQ4G0N0 100 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 TRIM40Q6P9F5 258 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 NDUFAF7Q7L592 441 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 GALNT16Q8N428 558 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 ZNF843Q8N446 348 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 SRFBP1Q8NEF9 429 aaKnown RBP12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 FDCSPQ8NFU4 85 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 OR4F6Q8NGB9 312 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 METTL21AQ8WXB1 218 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 CCDC126Q96EE4 140 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 VPS50Q96JG6 964 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 KCNC2Q96PR1 638 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 SERINC2Q96SA4 455 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 TBCDQ9BTW9 1192 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 RBCK1Q9BYM8 510 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 ZNF71Q9NQZ8 489 aaPredicted RBP12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 MKS1Q9NXB0 559 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 ZNF225Q9UK10 706 aa12.17□□□□□ -0.46
MTHFD1-208ENST00000554739 PRRC2CQ9Y520 2896 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 A0A088AWK7 358 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 IGHV1-45A0A0A0MS14 117 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 SAP18O00422 153 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 RTCAO00442 366 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 B3GALT2O43825 422 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 B4GALT2O60909 372 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 CDC123O75794 336 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 HPP00738 406 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 PDGFAP04085 211 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 MYL2P10916 166 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 RNH1P13489 461 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 CPA3P15088 417 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 ZNF10P21506 573 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 JAK1P23458 1154 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 ATP5A1P25705 553 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 ARL1P40616 181 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 MTTPP55157 894 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 RPS13P62277 151 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 Q0VFX4 171 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 AIMP2Q13155 320 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 CUL3Q13618 768 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 MFSD4BQ5TF39 518 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 FRG2Q64ET8 278 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 LETMD1Q6P1Q0 360 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 ANKRD37Q7Z713 158 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 SRRM1Q8IYB3 904 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 ACOT4Q8N9L9 421 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 RDH11Q8TC12 318 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 PPP4R1Q8TF05 950 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 RGMAQ96B86 450 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 MTFMTQ96DP5 389 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 IMMP1LQ96LU5 166 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms