RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 KLHL26Q53HC5 615 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 CATSPEREQ5SY80 951 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 C1QTNF12Q5T7M4 302 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 FRG2Q64ET8 278 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 TRIM68Q6AZZ1 485 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 TWF2Q6IBS0 349 aaKnown RBP3.29□□□□□ -1.88
SEC23A-207ENST00000554615 FDX2Q6P4F2 183 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 KLHL17Q6TDP4 642 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 TMEM107Q6UX40 140 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 HSDL2Q6YN16 418 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 CPNE9Q8IYJ1 553 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 OFCC1Q8IZS5 231 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 TMEM132CQ8N3T6 1108 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 ARL10Q8N8L6 244 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 DNAAF3Q8N9W5 541 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 CCNYQ8ND76 341 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 DIO2Q92813 273 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 FBXO32Q969P5 355 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 TRIM63Q969Q1 353 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF707Q96C28 371 aaPredicted RBP3.29□□□□□ -1.88
SEC23A-207ENST00000554615 TSNARE1Q96NA8 513 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 COL21A1Q96P44 957 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 FRG2BQ96QU4 278 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 NODALQ96S42 347 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 SLC39A3Q9BRY0 314 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 MED10Q9BTT4 135 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 WRAP53Q9BUR4 548 aaKnown RBP3.29□□□□□ -1.88
SEC23A-207ENST00000554615 CINPQ9BW66 212 aaPredicted RBP3.29□□□□□ -1.88
SEC23A-207ENST00000554615 BOCQ9BWV1 1114 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 REEP4Q9H6H4 257 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 POLR1BQ9H9Y6 1135 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 FANCEQ9HB96 536 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 INPP5EQ9NRR6 644 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 RNF186Q9NXI6 227 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 ANKRD10Q9NXR5 420 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 TXNDC16Q9P2K2 825 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 CACNG4Q9UBN1 327 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 TRMT6Q9UJA5 497 aaKnown RBP3.29□□□□□ -1.88
SEC23A-207ENST00000554615 KLHL21Q9UJP4 597 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 SERTAD3Q9UJW9 196 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 POLHQ9Y253 713 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 COQ6Q9Y2Z9 468 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 ENPP4Q9Y6X5 453 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 SHISA7A6NL88 538 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 HEPACAM2A8MVW5 462 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 LOC730098B7Z3J9 87 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 M0QZ92 97 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 NR5A2O00482 541 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 RFXANKO14593 260 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ZIC2O95409 532 aaPredicted RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PLGP00747 810 aaPredicted RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 VIPP01282 170 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 FABP3P05413 133 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 THBS1P07996 1170 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 HLA-EP13747 358 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 AGXTP21549 392 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 TACR1P25103 407 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 APEX1P27695 318 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 OR1E1P30953 314 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 CSKP41240 450 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 OMPP47874 163 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 LIM2P55344 173 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 FXYD6P3P58550 94 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 BTG1P62324 171 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 RPS4XP62701 263 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 EEF1A1P68104 462 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ECT2LQ008S8 904 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 C18orf21Q32NC0 220 aaPredicted RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SPANXN4Q5MJ08 99 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 NSUN5P2Q63ZY6 315 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SP5Q6BEB4 398 aaPredicted RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 GLB1LQ6UWU2 654 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PDZD3Q86UT5 571 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ARMC8Q8IUR7 673 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 EFHBQ8N7U6 833 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 FAM98AQ8NCA5 519 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 OR7D4Q8NG98 312 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 OR52N1Q8NH53 320 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PHOSPHO2Q8TCD6 241 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ADAMTS14Q8WXS8 1223 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 RMDN1Q96DB5 314 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SEPHS2Q99611 448 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PIP5K1AQ99755 562 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 NACA2Q9H009 215 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 KIR3DX1Q9H7L2 352 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 C12orf10Q9HB07 376 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 FARSBQ9NSD9 589 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 GLTPQ9NZD2 209 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PTTG3PQ9NZH4 202 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SLC17A4Q9Y2C5 497 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 CLDN16Q9Y5I7 305 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 A0A087WV62 115 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 C1orf232A0A0U1RR37 186 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 TRDV1A0A1B0GX56 115 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 A0A1W2PPW3 197 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 OR5K3A6NET4 321 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 HSPB2A8KAH6 182 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 LOC110117498-PIK3R3F6TDL0 507 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PLK4O00444 970 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms