RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 CHCHD4Q8N4Q1 142 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 KREMEN2Q8NCW0 462 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 GALNT11Q8NCW6 608 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 SORCS1Q8WY21 1168 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 ELMO1Q92556 727 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 OR52E6Q96RD3 313 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 ZBTB18Q99592 522 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 ACAT2Q9BWD1 397 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 SLC12A9Q9BXP2 914 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 CPEB1Q9BZB8 566 aaKnown RBP11.78□□□□□ -0.52
SHMT2-207ENST00000553837 SLC29A3Q9BZD2 475 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 MTG2Q9H4K7 406 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 LIN7BQ9HAP6 207 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 RASSF1Q9NS23 344 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 ASIC5Q9NY37 505 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 MAFFQ9ULX9 164 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 PPT2Q9UMR5 302 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 POLHQ9Y253 713 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 HCFC2Q9Y5Z7 792 aa11.78□□□□□ -0.52
SHMT2-207ENST00000553837 HELZP42694 1942 aaKnown RBP11.77□□□□□ -0.52
SHMT2-207ENST00000553837 TMEM202A6NGA9 273 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 ARHGEF9O43307 516 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 MOSPD3O75425 235 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 SLITRK5O94991 958 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 POP4O95707 220 aaKnown RBP11.77□□□□□ -0.53
SHMT2-207ENST00000553837 CXCL14O95715 111 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 DNTTP04053 509 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 ITPKAP23677 461 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 PTPN6P29350 595 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 AKT1P31749 480 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 CDKN2CP42773 168 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 GZMMP51124 257 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 BOP1Q14137 746 aaKnown RBP11.77□□□□□ -0.53
SHMT2-207ENST00000553837 Q5BKY6 102 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 PRSS36Q5K4E3 855 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 CACHD1Q5VU97 1274 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 LYPD8Q6UX82 237 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 ZNF551Q7Z340 670 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-207ENST00000553837 METTL3Q86U44 580 aaKnown RBP11.77□□□□□ -0.53
SHMT2-207ENST00000553837 ADIPOR2Q86V24 386 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 ANKRD46Q86W74 232 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 ZDHHC21Q8IVQ6 265 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 TCAIMQ8N3R3 496 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 OR2A12Q8NGT7 310 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 SKA2Q8WVK7 121 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-207ENST00000553837 FOXJ1Q92949 421 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-207ENST00000553837 APIPQ96GX9 242 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 NEDD4LQ96PU5 975 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 ERVK13-1Q9NX77 482 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 UPK3BL1B0FP48 263 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 UPK3BL2E5RIL1 263 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 TRIM77I1YAP6 450 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 GRM6O15303 877 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 WBP4O75554 376 aaKnown RBP11.77□□□□□ -0.53
SHMT2-207ENST00000553837 IL6P05231 212 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 OR56A5P0C7T3 313 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-207ENST00000553837 HOXB9P17482 250 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-207ENST00000553837 CBX5P45973 191 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 MAD2L1Q13257 205 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-207ENST00000553837 STK11Q15831 433 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 GPAT3Q53EU6 434 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 ARMCX4Q5H9R4 360 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 METTL2BQ6P1Q9 378 aaKnown RBP11.77□□□□□ -0.53
SHMT2-207ENST00000553837 FBXL6Q8N531 539 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 OR10Q1Q8NGQ4 319 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 OR5H6Q8NGV6 325 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 NETO1Q8TDF5 533 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 SELENOMQ8WWX9 145 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 SLC7A6Q92536 515 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 OMA1Q96E52 524 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 TSSK3Q96PN8 268 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 ATG10Q9H0Y0 220 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 WDR70Q9NW82 654 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 CHD7Q9P2D1 2997 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 KLHL42Q9P2K6 505 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 VPS4AQ9UN37 437 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 SLC22A14Q9Y267 594 aa11.77□□□□□ -0.53
SHMT2-207ENST00000553837 A0A1W2PQ72 361 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 C12orf71A8MTZ7 269 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 HIDE1A8MVS5 230 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 GFYI3L273 518 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 LRATO95237 230 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 CLTBP09497 229 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 ATP1B2P14415 290 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-207ENST00000553837 SDC1P18827 310 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 ERP29P30040 261 aaKnown RBP11.76□□□□□ -0.53
SHMT2-207ENST00000553837 IL12RB1P42701 662 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 ERVFC1P60507 584 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 RPS14P62263 151 aaKnown RBP11.76□□□□□ -0.53
SHMT2-207ENST00000553837 SLC14A1Q13336 389 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 TEAD2Q15562 447 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 ATG9BQ674R7 924 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 OR2T5Q6IEZ7 315 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 GCNT7Q6ZNI0 430 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 Q6ZVL8 140 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 OTOP2Q7RTS6 562 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 P3H2Q8IVL5 708 aa11.76□□□□□ -0.53
SHMT2-207ENST00000553837 GLB1L3Q8NCI6 653 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms