RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 DEFB127Q9H1M4 99 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 RHBGQ9H310 441 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 ARL15Q9NXU5 204 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 TAS2R13Q9NYV9 303 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 ZFATQ9P243 1243 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 FBXO5Q9UKT4 447 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 ACANP16112 2415 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 FLNAP21333 2647 aaKnown RBP13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 ABCA4P78363 2273 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 FIGNL2A6NMB9 653 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 NPIPA2E9PIF3 369 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 NPIPA3F8WFD2 350 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 HAUS5O94927 633 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 ACVR2AP27037 513 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 AHRP35869 848 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 VPS41P49754 854 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 AP1S2P56377 157 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 RAB8AP61006 207 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 PPIAP62937 165 aaKnown RBP13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 HYAL2Q12891 473 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 EMC4Q5J8M3 183 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 RPRMLQ8N4K4 120 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 PSD4Q8NDX1 1056 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 TRPV3Q8NET8 790 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 OR10Q1Q8NGQ4 319 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 GABPB2Q8TAK5 448 aaPredicted RBP13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 CREB3L4Q8TEY5 395 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 SLC5A11Q8WWX8 675 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 ATL1Q8WXF7 558 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 NRGNQ92686 78 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 PYCR2Q96C36 320 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 TRIM54Q9BYV2 358 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 CXXC4Q9H2H0 198 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 NECTIN3Q9NQS3 549 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 DNAJB12Q9NXW2 375 aaKnown RBP13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 KCMF1Q9P0J7 381 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 EDARQ9UNE0 448 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 YARS2Q9Y2Z4 477 aaKnown RBP13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 MMACHCQ9Y4U1 282 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 MAD1L1Q9Y6D9 718 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 AKAP6Q13023 2319 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 VPS13CQ709C8 3753 aa13.22□□□□□ -0.29
CHMP1A-210ENST00000551981 OR14I1A6ND48 311 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 FAM166BA8MTA8 275 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 A8MVJ9 347 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 BCKDKO14874 412 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 HOXB4P17483 251 aaPredicted RBP13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 HNF4AP41235 474 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 SCTRP47872 440 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 PHKG1Q16816 387 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 GXYLT1Q4G148 440 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 HSP90AA5PQ58FG0 334 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 HECTD2Q5U5R9 776 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 ANKRD22Q5VYY1 191 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 SLC22A16Q86VW1 577 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 GPATCH11Q8N954 259 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 MCUQ8NE86 351 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 OR56A3Q8NH54 315 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 LINGO1Q96FE5 620 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 NDNQ99608 321 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 PNPLA3Q9NST1 481 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 HPF1Q9NWY4 346 aa13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 PPIEQ9UNP9 301 aaKnown RBP13.21□□□□□ -0.29
CHMP1A-210ENST00000551981 PRRC2AP48634 2157 aaKnown RBP13.21□□□□□ -0.3
CHMP1A-210ENST00000551981 GOLGA8MH3BSY2 632 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 FAM155BO75949 473 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 ZFAND5O76080 213 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 KLK2P20151 261 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 ZFP36L2P47974 494 aaKnown RBP13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 BBS9Q3SYG4 887 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 CATSPEREQ5SY80 951 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 NDUFAF5Q5TEU4 345 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 ZNF585AQ6P3V2 769 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 PAQR3Q6TCH7 311 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 B3GNT6Q6ZMB0 384 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 GK5Q6ZS86 529 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 CA13Q8N1Q1 262 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 OR2M7Q8NG81 312 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 OR5M9Q8NGP3 310 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 ASB15Q8WXK1 588 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 NEIL2Q969S2 332 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 NCLNQ969V3 563 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 PDLIM2Q96JY6 352 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 FAR2Q96K12 515 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 SERPINB12Q96P63 405 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 OR4K3Q96R72 315 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 SMC6Q96SB8 1091 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 AIF1LQ9BQI0 150 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 POLDIP3Q9BY77 421 aaKnown RBP13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 ZDHHC11Q9H8X9 412 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 PNO1Q9NRX1 252 aaKnown RBP13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 IARS2Q9NSE4 1012 aaKnown RBP13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 CCM2LQ9NUG4 571 aaPredicted RBP13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 DYRK1BQ9Y463 629 aa13.2□□□□□ -0.3
CHMP1A-210ENST00000551981 SYNDIG1LA6NDD5 238 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 FAM47E-STBD1D6RA91 191 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 CTAG2O75638 210 aa13.19□□□□□ -0.3
CHMP1A-210ENST00000551981 KRT14P02533 472 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms