RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TNPO3Q9Y5L0 923 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 SPENQ96T58 3664 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-208ENST00000550102 A0A0G2JN53 185 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 OR2W5A6NFC9 320 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 B3GALT2O43825 422 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 B4GALT2O60909 372 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 WFS1O76024 890 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 PCBP2Q15366 365 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 PLAG1Q6DJT9 500 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 IGFL2Q6UWQ7 119 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 QSOX2Q6ZRP7 698 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 MYLK4Q86YV6 388 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 LAS2Q8IYD9 372 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 IQCKQ8N0W5 287 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 CNPY4Q8N129 248 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 CA13Q8N1Q1 262 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 PLPP5Q8NEB5 264 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 CPT1CQ8TCG5 803 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 BRIX1Q8TDN6 353 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 ADAMTS18Q8TE60 1221 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 TSLPQ969D9 159 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 IMMP1LQ96LU5 166 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 ACTR8Q9H981 624 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 ZNF358Q9NW07 568 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 FETUBQ9UGM5 382 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 PLAAQ9Y263 795 aa16.22■□□□□ 0.19
CHMP1A-208ENST00000550102 ASH1LQ9NR48 2969 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 IGHV3-20A0A0C4DH32 117 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 LRRC14BA6NHZ5 514 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 PRMT3O60678 531 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 DNAJB6O75190 326 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 SMIM24O75264 130 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 TBX6O95947 436 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 CELA2AP08217 269 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 ITGAMP11215 1152 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 PCNAP12004 261 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 GCAP28676 217 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 TNFRSF8P28908 595 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 SOX11P35716 441 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 PLA2G16P53816 162 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 GTF2H2Q13888 395 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 IGFBP7Q16270 282 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 EXT1Q16394 746 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 BTBD16Q32M84 506 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 SFT2D3Q587I9 215 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 GTF2H2CQ6P1K8 395 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 PAPD4Q6PIY7 484 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 ADGRD1Q6QNK2 874 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 LINC00696Q6ZRV3 163 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 Q6ZS92 163 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 ATCAYQ86WG3 371 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 SIRT6Q8N6T7 355 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 PTGR2Q8N8N7 351 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 QRFPRQ96P65 431 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 KCNC2Q96PR1 638 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 LPAR4Q99677 370 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 MRPL57Q9BQC6 102 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 NPLQ9BXD5 320 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 MS4A8Q9BY19 250 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 MRPL46Q9H2W6 279 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 PTGFRNQ9P2B2 879 aa16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 PSMC3IPQ9P2W1 217 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-208ENST00000550102 PTPN13Q12923 2485 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 STX16-NPEPL1H3BU86 382 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 E2F3O00716 465 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 STX16O14662 325 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 UGDHO60701 494 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 SIX3O95343 332 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 MYBL2P10244 700 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 EEF1DP29692 281 aaKnown RBP16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 MTTPP55157 894 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 OR4D2P58180 307 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 SLC29A2Q14542 456 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 PLEKHN1Q494U1 663 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 TMEM35AQ53FP2 167 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 PRR30Q53SZ7 412 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 LIPJQ5W064 366 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 ABHD17CQ6PCB6 329 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 GOLGA7Q7Z5G4 137 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 SRFBP1Q8NEF9 429 aaKnown RBP16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 ARMC2Q8NEN0 867 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 OR7G3Q8NG95 312 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 ZNF473Q8WTR7 871 aaKnown RBP16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 PSMF1Q92530 271 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 PTCHD1Q96NR3 888 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 F2RL3Q96RI0 385 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 LMF1Q96S06 567 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 SERINC2Q96SA4 455 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 ROGDIQ9GZN7 287 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 EPB41L4BQ9H329 900 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 PRDM9Q9NQV7 894 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 ADGRE2Q9UHX3 823 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 MRPS33Q9Y291 106 aaKnown RBP16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 MMACHCQ9Y4U1 282 aa16.2■□□□□ 0.18
CHMP1A-208ENST00000550102 IGKV3D-11A0A0A0MRZ8 115 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 IQANK1A0A1B0GTG1 560 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 DYTNA2CJ06 578 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 MAOAP21397 527 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 CERS1P27544 350 aa16.19■□□□□ 0.18
CHMP1A-208ENST00000550102 RAB38P57729 211 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms