RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CDC123O75794 336 aaPredicted RBP14.96□□□□□ -0.01
DDX54-204ENST00000546898 TBX6O95947 436 aaPredicted RBP14.96□□□□□ -0.01
DDX54-204ENST00000546898 FAM153BP0C7A2 387 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 TNFRSF8P28908 595 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 ABRAXAS2Q15018 415 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 NSDHLQ15738 373 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 FAM153CQ494X1 144 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 TEX35Q5T0J7 233 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 PLAG1Q6DJT9 500 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 MED27Q6P2C8 311 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 ADGRD1Q6QNK2 874 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 ATCAYQ86WG3 371 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 TEX9Q8N6V9 391 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 LRRN4CLQ8ND94 238 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 SRFBP1Q8NEF9 429 aaKnown RBP14.96□□□□□ -0.01
DDX54-204ENST00000546898 BRIX1Q8TDN6 353 aaKnown RBP14.96□□□□□ -0.01
DDX54-204ENST00000546898 PSMF1Q92530 271 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 ROGDIQ9GZN7 287 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 ILKAPQ9H0C8 392 aaPredicted RBP14.96□□□□□ -0.01
DDX54-204ENST00000546898 XPR1Q9UBH6 696 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 ADGRE2Q9UHX3 823 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 TSC22D4Q9Y3Q8 395 aa14.96□□□□□ -0.01
DDX54-204ENST00000546898 PRRC2CQ9Y520 2896 aaKnown RBP14.95□□□□□ -0.02
DDX54-204ENST00000546898 SETXQ7Z333 2677 aaKnown RBP14.95□□□□□ -0.02
DDX54-204ENST00000546898 SYNDIG1LA6NDD5 238 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 STX16-NPEPL1H3BU86 382 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 STX16O14662 325 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 B3GALT2O43825 422 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 DNAJB6O75190 326 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 SMIM24O75264 130 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 SEC24DO94855 1032 aaPredicted RBP14.95□□□□□ -0.02
DDX54-204ENST00000546898 UQCRHP07919 91 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 GCAP28676 217 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 RAB38P57729 211 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 BTN3A2P78410 334 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 GTF2H2Q13888 395 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 SLC29A2Q14542 456 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 EXT1Q16394 746 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 SFT2D3Q587I9 215 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 LIPJQ5W064 366 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 ADNP2Q6IQ32 1131 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 GTF2H2CQ6P1K8 395 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 ABHD17CQ6PCB6 329 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 TIFABQ6ZNK6 161 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 LCA5Q86VQ0 697 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 OR7G3Q8NG95 312 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 ZNF473Q8WTR7 871 aaKnown RBP14.95□□□□□ -0.02
DDX54-204ENST00000546898 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.95□□□□□ -0.02
DDX54-204ENST00000546898 TSLPQ969D9 159 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 SCYL1Q96KG9 808 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 QRFPRQ96P65 431 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 SERINC2Q96SA4 455 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 LPAR4Q99677 370 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 MRPL57Q9BQC6 102 aaKnown RBP14.95□□□□□ -0.02
DDX54-204ENST00000546898 MS4A8Q9BY19 250 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 ACTR8Q9H981 624 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 COPS7BQ9H9Q2 264 aaPredicted RBP14.95□□□□□ -0.02
DDX54-204ENST00000546898 ZNF358Q9NW07 568 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 MRPS33Q9Y291 106 aaKnown RBP14.95□□□□□ -0.02
DDX54-204ENST00000546898 MMACHCQ9Y4U1 282 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 FLNCQ14315 2725 aa14.95□□□□□ -0.02
DDX54-204ENST00000546898 IGHV3-20A0A0C4DH32 117 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 IQANK1A0A1B0GTG1 560 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 OR2W5A6NFC9 320 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 E2F3O00716 465 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 PRMT3O60678 531 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 B4GALT2O60909 372 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 CELA2AP08217 269 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 ITGAMP11215 1152 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 PCNAP12004 261 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 PLA2G16P53816 162 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 MTTPP55157 894 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 OR4D2P58180 307 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 RCN2Q14257 317 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 INPP5JQ15735 1006 aaPredicted RBP14.94□□□□□ -0.02
DDX54-204ENST00000546898 IGFBP7Q16270 282 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 BTBD16Q32M84 506 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 PLEKHN1Q494U1 663 aaPredicted RBP14.94□□□□□ -0.02
DDX54-204ENST00000546898 TMEM35AQ53FP2 167 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 B3GNTL1Q67FW5 361 aaPredicted RBP14.94□□□□□ -0.02
DDX54-204ENST00000546898 PAPD4Q6PIY7 484 aaKnown RBP14.94□□□□□ -0.02
DDX54-204ENST00000546898 LINC00696Q6ZRV3 163 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 GOLGA7Q7Z5G4 137 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 GSPT2Q8IYD1 628 aaKnown RBP14.94□□□□□ -0.02
DDX54-204ENST00000546898 SIRT6Q8N6T7 355 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 PTGR2Q8N8N7 351 aaPredicted RBP14.94□□□□□ -0.02
DDX54-204ENST00000546898 ARMC2Q8NEN0 867 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 M1APQ8TC57 530 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 REPS1Q96D71 796 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 PTCHD1Q96NR3 888 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 KCNC2Q96PR1 638 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 CCDC77Q9BR77 488 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 TBCDQ9BTW9 1192 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 MRPL46Q9H2W6 279 aaKnown RBP14.94□□□□□ -0.02
DDX54-204ENST00000546898 EPB41L4BQ9H329 900 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 PRDM9Q9NQV7 894 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 LUZP4Q9P127 313 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 PTGFRNQ9P2B2 879 aa14.94□□□□□ -0.02
DDX54-204ENST00000546898 PSMC3IPQ9P2W1 217 aaPredicted RBP14.94□□□□□ -0.02
DDX54-204ENST00000546898 TEKT2Q9UIF3 430 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms