RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 OR8K5Q8NH50 307 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PPP4R1Q8TF05 950 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ZNF483Q8TF39 744 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 RERGQ96A58 199 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ZUFSPQ96AP4 578 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 WDR34Q96EX3 536 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PTCD3Q96EY7 689 aaKnown RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 DHRS1Q96LJ7 313 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PRAP1Q96NZ9 151 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 FCRL4Q96PJ5 515 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 TEFMQ96QE5 360 aaKnown RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ZNF382Q96SR6 550 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 TM9SF2Q99805 663 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 CTRCQ99895 268 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 AIF1LQ9BQI0 150 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 EFCAB11Q9BUY7 163 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 MECRQ9BV79 373 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 DDA1Q9BW61 102 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 CAPS2Q9BXY5 557 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 SPNS1Q9H2V7 528 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 GSTO2Q9H4Y5 243 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 IPPKQ9H8X2 491 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ACTR8Q9H981 624 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 SYNPO2LQ9H987 977 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 APMAPQ9HDC9 416 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 KCNK9Q9NPC2 374 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 SEMA4BQ9NPR2 832 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ASCL3Q9NQ33 180 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ACSS2Q9NR19 701 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 TMEM184CQ9NVA4 438 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 OXSMQ9NWU1 459 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 IRAK4Q9NWZ3 460 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 GEMIN8Q9NWZ8 242 aaKnown RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 SLC39A1Q9NY26 324 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 NKIRAS1Q9NYS0 192 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PRR13Q9NZ81 148 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PILRAQ9UKJ1 303 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ANGPTL2Q9UKU9 493 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 RARRES3Q9UL19 164 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PLCL2Q9UPR0 1127 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 STK38LQ9Y2H1 464 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PCDHGA3Q9Y5H0 932 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 CACNA1GO43497 2377 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 SCN3AQ9NY46 2000 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 FEZF1A0PJY2 475 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 H0YGG7 62 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 OR7A17O14581 309 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 POLR1CO15160 346 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-211ENST00000546304 P2RX6O15547 441 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 NDUFS4O43181 175 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 BRINP1O60477 761 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 UGDHO60701 494 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 OR2B3O76000 313 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 SUPT7LO94864 414 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 TNFSF15O95150 251 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 MLYCDO95822 493 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 OTCP00480 354 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 SLC35G6P0C7Q6 338 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 DHRS4L1P0CG22 281 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 C1GALT1C1LP0DN25 315 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 FGF5P12034 268 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 TSPAN8P19075 237 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 CXCR2P25025 360 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 GSTM2P28161 218 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 RBMS1P29558 406 aaKnown RBP6.03□□□□□ -1.44
PRKDC-211ENST00000546304 ALDH3A1P30838 453 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 CCNG1P51959 295 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 SLC18A1P54219 525 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 NAGLUP54802 743 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 CDH13P55290 713 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 VSX2P58304 361 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-211ENST00000546304 DNAJB13P59910 316 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 ARF3P61204 181 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-211ENST00000546304 NAA20P61599 178 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 CYP4F2P78329 520 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 RELAQ04206 551 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 CHRNEQ04844 493 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 ASPHQ12797 758 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 DOC2AQ14183 400 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 RTP5Q14D33 572 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 TBCCQ15814 346 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 GGTA1PQ4G0N0 100 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 UNC50Q53HI1 259 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 HSP90B2PQ58FF3 399 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 TCTE1Q5JU00 501 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 CFAP157Q5JU67 520 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 DCAF12Q5T6F0 453 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 FRMPD2BQ6IN97 320 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 GRHL2Q6ISB3 625 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 TMIGD1Q6UXZ0 262 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 CEACAM20Q6UY09 585 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 VN1R4Q7Z5H5 301 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 SPPL2CQ8IUH8 684 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 TMEM126BQ8IUX1 230 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 GPR135Q8IZ08 494 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 KRT78Q8N1N4 520 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 CCNYL1Q8N7R7 359 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 MFSD9Q8NBP5 474 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 ZNF740Q8NDX6 193 aa6.03□□□□□ -1.44
PRKDC-211ENST00000546304 TTLQ8NG68 377 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms