RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TSPAN8P19075 237 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 CCR10P46092 362 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 BTN3A2P78410 334 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 KHDRBS2Q5VWX1 349 aaKnown RBP18.05■□□□□ 0.48
DDX55-211ENST00000544429 FRG2Q64ET8 278 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 TRIM40Q6P9F5 258 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 TMEM205Q6UW68 189 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 MILR1Q7Z6M3 343 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 EXOC3L1Q86VI1 746 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 MYLK4Q86YV6 388 aaPredicted RBP18.05■□□□□ 0.48
DDX55-211ENST00000544429 EXD3Q8N9H8 876 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 TMEM102Q8N9M5 508 aaPredicted RBP18.05■□□□□ 0.48
DDX55-211ENST00000544429 TCP10LQ8TDR4 215 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 TRPC4APQ8TEL6 797 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 ATP6V1E2Q96A05 226 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 KCNC2Q96PR1 638 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 FRG2BQ96QU4 278 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 SMC6Q96SB8 1091 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 MTERF1Q99551 399 aaKnown RBP18.05■□□□□ 0.48
DDX55-211ENST00000544429 MESP1Q9BRJ9 268 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 ZNF717Q9BY31 904 aaPredicted RBP18.05■□□□□ 0.48
DDX55-211ENST00000544429 TRIM55Q9BYV6 548 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 VN1R1Q9GZP7 353 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 SLC17A7Q9P2U7 560 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 TRPS1Q9UHF7 1281 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 TUBD1Q9UJT1 453 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 TLN1Q9Y490 2541 aaKnown RBP18.04■□□□□ 0.48
DDX55-211ENST00000544429 SPAG7O75391 227 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 CEACAM4O75871 244 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 ETHE1O95571 254 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 MLYCDO95822 493 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 TGFB1P01137 390 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 ETV4P43268 484 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 TSFMP43897 325 aaKnown RBP18.04■□□□□ 0.48
DDX55-211ENST00000544429 PLA2G16P53816 162 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 EMP2P54851 167 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 POLE2P56282 527 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 OLR1P78380 273 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 RHAGQ02094 409 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 LCP2Q13094 533 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 CUL3Q13618 768 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 RUNX2Q13950 521 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 CPZQ66K79 652 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 ZNF793Q6ZN11 406 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 FRMD7Q6ZUT3 714 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 CHSY3Q70JA7 882 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 PRSS58Q8IYP2 241 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 CA13Q8N1Q1 262 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 SRFBP1Q8NEF9 429 aaKnown RBP18.04■□□□□ 0.48
DDX55-211ENST00000544429 ARMC2Q8NEN0 867 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 OR11G2Q8NGC1 345 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 TBC1D20Q96BZ9 403 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 PEX11GQ96HA9 241 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 SERINC2Q96SA4 455 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 TBCDQ9BTW9 1192 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 YIPF2Q9BWQ6 316 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 ING2Q9H160 280 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 ADNPQ9H2P0 1102 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 OR51B5Q9H339 312 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 MID2Q9UJV3 735 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 STK38LQ9Y2H1 464 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 ACTL7BQ9Y614 415 aa18.04■□□□□ 0.48
DDX55-211ENST00000544429 KALRNO60229 2985 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 A0A0G2JN53 185 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 PLPP1O14494 284 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 UBFD1O14562 309 aaKnown RBP18.03■□□□□ 0.48
DDX55-211ENST00000544429 OR4F21O95013 312 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 FHP07954 510 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 FAM87AP0C7U9 286 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 ATP5A1P25705 553 aaKnown RBP18.03■□□□□ 0.48
DDX55-211ENST00000544429 PTX3P26022 381 aaPredicted RBP18.03■□□□□ 0.48
DDX55-211ENST00000544429 NEK2P51955 445 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 NAGLUP54802 743 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 MTTPP55157 894 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 PKNOX1P55347 436 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 SOX8P57073 446 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 RPS13P62277 151 aaKnown RBP18.03■□□□□ 0.48
DDX55-211ENST00000544429 TGM3Q08188 693 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 RBBP7Q16576 425 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 SOWAHCQ53LP3 525 aaPredicted RBP18.03■□□□□ 0.48
DDX55-211ENST00000544429 DCAF10Q5QP82 559 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 LIPMQ5VYY2 423 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 C10orf107Q8IVU9 208 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 PLPP5Q8NEB5 264 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 PPP4R1Q8TF05 950 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 AGAP11Q8TF27 550 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 FAM111AQ96PZ2 611 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 MLXIPLQ9NP71 852 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 KCMF1Q9P0J7 381 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 RALYQ9UKM9 306 aaKnown RBP18.03■□□□□ 0.48
DDX55-211ENST00000544429 MKL2Q9ULH7 1088 aa18.03■□□□□ 0.48
DDX55-211ENST00000544429 A0A088AWK7 358 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 ARGFXA6NJG6 315 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 SEMA3DO95025 777 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 ESRRBO95718 433 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 RNH1P13489 461 aaKnown RBP18.02■□□□□ 0.48
DDX55-211ENST00000544429 H2AFXP16104 143 aaPredicted RBP18.02■□□□□ 0.48
DDX55-211ENST00000544429 ZNF10P21506 573 aaPredicted RBP18.02■□□□□ 0.48
DDX55-211ENST00000544429 RRADP55042 308 aa18.02■□□□□ 0.48
DDX55-211ENST00000544429 DDX39BQ13838 428 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms