RNA–Protein interactions for RNA: ENST00000542150.5

COPS7A-213, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-213ENST00000542150 HIST1H2ADP20671 130 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 PGGT1BP53609 377 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 SKP1P63208 163 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 CRYMQ14894 314 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 CYP1B1Q16678 543 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 ARHGAP11AQ6P4F7 1023 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 GALNT7Q86SF2 657 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 PALM2Q8IXS6 379 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 CYP4Z2PQ8N1L4 340 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 CA13Q8N1Q1 262 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 SPC24Q8NBT2 197 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 RND1Q92730 232 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 PDLIM5Q96HC4 596 aaKnown RBP11.32□□□□□ -0.6
COPS7A-213ENST00000542150 HIST1H2AHQ96KK5 128 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 HIST1H2AJQ99878 128 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 H2AFJQ9BTM1 129 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 TMUB1Q9BVT8 246 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 TP63Q9H3D4 680 aaPredicted RBP11.32□□□□□ -0.6
COPS7A-213ENST00000542150 ZDHHC11Q9H8X9 412 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 ARL15Q9NXU5 204 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 KCNN3Q9UGI6 736 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 MMACHCQ9Y4U1 282 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 MAD1L1Q9Y6D9 718 aa11.32□□□□□ -0.6
COPS7A-213ENST00000542150 PDE9AO76083 593 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 MYO1DO94832 1006 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 GLSO94925 669 aaPredicted RBP11.31□□□□□ -0.6
COPS7A-213ENST00000542150 SERPIND1P05546 499 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 SERPINA6P08185 405 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 CCDC175P0C221 793 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 DNAJA1P31689 397 aaKnown RBP11.31□□□□□ -0.6
COPS7A-213ENST00000542150 HNF4AP41235 474 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 CLCN2P51788 898 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 NUP107P57740 925 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 IL2P60568 153 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 GPR85P60893 370 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 RUNX2Q13950 521 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 CSHL1Q14406 222 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 PPP1R3AQ16821 1122 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 GXYLT1Q4G148 440 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 XKR6Q5GH73 641 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 NXPE4Q6UWF7 544 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 SBSNQ6UWP8 590 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 C16orf47Q6ZP98 133 aaPredicted RBP11.31□□□□□ -0.6
COPS7A-213ENST00000542150 CCDC71Q8IV32 467 aaPredicted RBP11.31□□□□□ -0.6
COPS7A-213ENST00000542150 TRPV3Q8NET8 790 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 ATL1Q8WXF7 558 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 SEC16BQ96JE7 1060 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 PDLIM2Q96JY6 352 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 CXXC4Q9H2H0 198 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 PELI2Q9HAT8 420 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 KCNJ16Q9NPI9 418 aa11.31□□□□□ -0.6
COPS7A-213ENST00000542150 FAM90A27PA6NNH2 459 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 USP27XA6NNY8 438 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 KLK8O60259 260 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 CDC40O60508 579 aaKnown RBP eCLIP11.3□□□□□ -0.6
COPS7A-213ENST00000542150 TBX6O95947 436 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-213ENST00000542150 ENO2P09104 434 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-213ENST00000542150 PGAM1P18669 254 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 PPP2R1BP30154 601 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 HNRNPFP52597 415 aaKnown RBP11.3□□□□□ -0.6
COPS7A-213ENST00000542150 ART1P52961 327 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 PMPCAQ10713 525 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 TEDDM1Q5T9Z0 273 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 RNASEH2BQ5TBB1 312 aaKnown RBP11.3□□□□□ -0.6
COPS7A-213ENST00000542150 ACAD11Q709F0 780 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 IGDCC3Q8IVU1 814 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 GPALPP1Q8IXQ4 340 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 TBC1D19Q8N5T2 526 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 TMEM156Q8N614 296 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 TMEM52Q8NDY8 209 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 ARMC2Q8NEN0 867 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 TRIM58Q8NG06 486 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 OR2M7Q8NG81 312 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 NCLNQ969V3 563 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 MAGOHBQ96A72 148 aaKnown RBP11.3□□□□□ -0.6
COPS7A-213ENST00000542150 VMP1Q96GC9 406 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 TSNARE1Q96NA8 513 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 DEFB127Q9H1M4 99 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 RHBGQ9H310 441 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 TIMMDC1Q9NPL8 285 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 LZTFL1Q9NQ48 299 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
COPS7A-213ENST00000542150 KCMF1Q9P0J7 381 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 SLC17A6Q9P2U8 582 aa11.3□□□□□ -0.6
COPS7A-213ENST00000542150 YARS2Q9Y2Z4 477 aaKnown RBP11.3□□□□□ -0.6
COPS7A-213ENST00000542150 NIPBLQ6KC79 2804 aaeCLIP11.3□□□□□ -0.6
COPS7A-213ENST00000542150 A0A0G2JMM0 328 aa11.29□□□□□ -0.6
COPS7A-213ENST00000542150 A0A1B0GVC2 190 aa11.29□□□□□ -0.6
COPS7A-213ENST00000542150 A0A1W2PPB8 328 aa11.29□□□□□ -0.6
COPS7A-213ENST00000542150 A0A1W2PRS3 328 aa11.29□□□□□ -0.6
COPS7A-213ENST00000542150 FAM221AA4D161 298 aa11.29□□□□□ -0.6
COPS7A-213ENST00000542150 URADA6NGE7 173 aa11.29□□□□□ -0.6
COPS7A-213ENST00000542150 KIR3DP1A8MWS1 328 aa11.29□□□□□ -0.6
COPS7A-213ENST00000542150 PSMD12O00232 456 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-213ENST00000542150 ZFAND5O76080 213 aa11.29□□□□□ -0.6
COPS7A-213ENST00000542150 OR6B1O95007 311 aa11.29□□□□□ -0.6
COPS7A-213ENST00000542150 GUCA1CO95843 209 aa11.29□□□□□ -0.6
COPS7A-213ENST00000542150 IGHG3P01860 377 aa11.29□□□□□ -0.6
COPS7A-213ENST00000542150 TUBB4AP04350 444 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms