RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 MARK1Q9P0L2 795 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 STOX2Q9P2F5 926 aaPredicted RBP12.01□□□□□ -0.49
RNF4-222ENST00000541204 POU2F3Q9UKI9 436 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 CXorf51AA0A1B0GTR3 108 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 TMEM229AB2RXF0 380 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 ZNF197O14709 1029 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 ADH1CP00326 375 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 GSTM1P09488 218 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 HNRNPA1P09651 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
RNF4-222ENST00000541204 ACPPP15309 386 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 GTF2E2P29084 291 aaKnown RBP12.01□□□□□ -0.49
RNF4-222ENST00000541204 IDH2P48735 452 aaKnown RBP12.01□□□□□ -0.49
RNF4-222ENST00000541204 DCDC1P59894 354 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 SP140Q13342 867 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 TSEN54Q7Z6J9 526 aaKnown RBP12.01□□□□□ -0.49
RNF4-222ENST00000541204 FCGR1BQ92637 280 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 GGHQ92820 318 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 ARRDC3Q96B67 414 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 OTUB2Q96DC9 234 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 CCM2Q9BSQ5 444 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 SP140LQ9H930 580 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 ADPRHL2Q9NX46 363 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 GPR83Q9NYM4 423 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 PCDHGB3Q9Y5G1 929 aa12.01□□□□□ -0.49
RNF4-222ENST00000541204 HELZP42694 1942 aaKnown RBP12.01□□□□□ -0.49
RNF4-222ENST00000541204 CEP290O15078 2479 aa12□□□□□ -0.49
RNF4-222ENST00000541204 GABRR3A8MPY1 467 aa12□□□□□ -0.49
RNF4-222ENST00000541204 TNFRSF11BO00300 401 aa12□□□□□ -0.49
RNF4-222ENST00000541204 EIF3FO00303 357 aaPredicted RBP12□□□□□ -0.49
RNF4-222ENST00000541204 DSCR3O14972 297 aa12□□□□□ -0.49
RNF4-222ENST00000541204 LZTS3O60299 673 aaPredicted RBP12□□□□□ -0.49
RNF4-222ENST00000541204 ETHE1O95571 254 aa12□□□□□ -0.49
RNF4-222ENST00000541204 DLGAP3O95886 979 aa12□□□□□ -0.49
RNF4-222ENST00000541204 GBAP04062 536 aa12□□□□□ -0.49
RNF4-222ENST00000541204 ABCB1P08183 1280 aaPredicted RBP12□□□□□ -0.49
RNF4-222ENST00000541204 GGT2P36268 569 aa12□□□□□ -0.49
RNF4-222ENST00000541204 UGT2B10P36537 528 aa12□□□□□ -0.49
RNF4-222ENST00000541204 CYP4F2P78329 520 aa12□□□□□ -0.49
RNF4-222ENST00000541204 ACSM2AQ08AH3 577 aa12□□□□□ -0.49
RNF4-222ENST00000541204 CDC20Q12834 499 aa12□□□□□ -0.49
RNF4-222ENST00000541204 GAB1Q13480 694 aa12□□□□□ -0.49
RNF4-222ENST00000541204 STARD3Q14849 445 aa12□□□□□ -0.49
RNF4-222ENST00000541204 RGNQ15493 299 aa12□□□□□ -0.49
RNF4-222ENST00000541204 TBCEQ15813 527 aaPredicted RBP12□□□□□ -0.49
RNF4-222ENST00000541204 HKDC1Q2TB90 917 aa12□□□□□ -0.49
RNF4-222ENST00000541204 ACSM2BQ68CK6 577 aa12□□□□□ -0.49
RNF4-222ENST00000541204 ANGPTL8Q6UXH0 198 aa12□□□□□ -0.49
RNF4-222ENST00000541204 LACC1Q8IV20 430 aa12□□□□□ -0.49
RNF4-222ENST00000541204 MMAAQ8IVH4 418 aaKnown RBP12□□□□□ -0.49
RNF4-222ENST00000541204 SYTL1Q8IYJ3 562 aa12□□□□□ -0.49
RNF4-222ENST00000541204 NAGSQ8N159 534 aa12□□□□□ -0.49
RNF4-222ENST00000541204 SLC5A8Q8N695 610 aa12□□□□□ -0.49
RNF4-222ENST00000541204 SCAIQ8N9R8 606 aa12□□□□□ -0.49
RNF4-222ENST00000541204 CHST8Q9H2A9 424 aa12□□□□□ -0.49
RNF4-222ENST00000541204 SGK2Q9HBY8 427 aa12□□□□□ -0.49
RNF4-222ENST00000541204 CPNE5Q9HCH3 593 aa12□□□□□ -0.49
RNF4-222ENST00000541204 ANKHQ9HCJ1 492 aa12□□□□□ -0.49
RNF4-222ENST00000541204 RAPGEFL1Q9UHV5 662 aa12□□□□□ -0.49
RNF4-222ENST00000541204 LYVE1Q9Y5Y7 322 aa12□□□□□ -0.49
RNF4-222ENST00000541204 DNAH14Q0VDD8 3507 aa12□□□□□ -0.49
RNF4-222ENST00000541204 CLCA1A8K7I4 914 aa12□□□□□ -0.49
RNF4-222ENST00000541204 HEPACAM2A8MVW5 462 aa12□□□□□ -0.49
RNF4-222ENST00000541204 H3BM21 787 aa12□□□□□ -0.49
RNF4-222ENST00000541204 M0R129 80 aa12□□□□□ -0.49
RNF4-222ENST00000541204 SAP18O00422 153 aaKnown RBP12□□□□□ -0.49
RNF4-222ENST00000541204 SPINT1O43278 529 aa12□□□□□ -0.49
RNF4-222ENST00000541204 GCM2O75603 506 aaPredicted RBP12□□□□□ -0.49
RNF4-222ENST00000541204 AP2A2O94973 939 aa12□□□□□ -0.49
RNF4-222ENST00000541204 KCNK2O95069 426 aa12□□□□□ -0.49
RNF4-222ENST00000541204 CATP04040 527 aaKnown RBP12□□□□□ -0.49
RNF4-222ENST00000541204 CDK1P06493 297 aa12□□□□□ -0.49
RNF4-222ENST00000541204 STSP08842 583 aa12□□□□□ -0.49
RNF4-222ENST00000541204 OR1E2P47887 323 aa12□□□□□ -0.49
RNF4-222ENST00000541204 CRISP3P54108 245 aa12□□□□□ -0.49
RNF4-222ENST00000541204 CSNK2BP67870 215 aa12□□□□□ -0.49
RNF4-222ENST00000541204 MEF2AQ02078 507 aaPredicted RBP12□□□□□ -0.49
RNF4-222ENST00000541204 TPRG1LQ5T0D9 272 aa12□□□□□ -0.49
RNF4-222ENST00000541204 USP43Q70EL4 1123 aa12□□□□□ -0.49
RNF4-222ENST00000541204 GET4Q7L5D6 327 aaPredicted RBP12□□□□□ -0.49
RNF4-222ENST00000541204 TRMT11Q7Z4G4 463 aaKnown RBP12□□□□□ -0.49
RNF4-222ENST00000541204 CPA6Q8N4T0 437 aa12□□□□□ -0.49
RNF4-222ENST00000541204 DNAJC22Q8N4W6 341 aa12□□□□□ -0.49
RNF4-222ENST00000541204 WDR20Q8TBZ3 569 aa12□□□□□ -0.49
RNF4-222ENST00000541204 ZNF675Q8TD23 568 aa12□□□□□ -0.49
RNF4-222ENST00000541204 MYDGFQ969H8 173 aa12□□□□□ -0.49
RNF4-222ENST00000541204 TIFAQ96CG3 184 aa12□□□□□ -0.49
RNF4-222ENST00000541204 NRTNQ99748 197 aa12□□□□□ -0.49
RNF4-222ENST00000541204 DOHHQ9BU89 302 aa12□□□□□ -0.49
RNF4-222ENST00000541204 OR51E2Q9H255 320 aa12□□□□□ -0.49
RNF4-222ENST00000541204 NDUFAF4Q9P032 175 aa12□□□□□ -0.49
RNF4-222ENST00000541204 DEC1Q9P2X7 70 aa12□□□□□ -0.49
RNF4-222ENST00000541204 GULP1Q9UBP9 304 aa12□□□□□ -0.49
RNF4-222ENST00000541204 C1orf226A1L170 272 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 ISPDA4D126 451 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 SCAMP2O15127 329 aaKnown RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 SLC16A5O15375 505 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 PCDH7O60245 1069 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 PRMT3O60678 531 aa11.99□□□□□ -0.49
RNF4-222ENST00000541204 PSIP1O75475 530 aaKnown RBP11.99□□□□□ -0.49
RNF4-222ENST00000541204 OXSR1O95747 527 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms