RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 NUDT18Q6ZVK8 323 aa12.54□□□□□ -0.4
DNMT1-203ENST00000540357 PJA1Q8NG27 643 aa12.54□□□□□ -0.4
DNMT1-203ENST00000540357 NR4A3Q92570 626 aa12.54□□□□□ -0.4
DNMT1-203ENST00000540357 CLEC4AQ9UMR7 237 aa12.54□□□□□ -0.4
DNMT1-203ENST00000540357 CLCA3PQ9Y6N3 262 aa12.54□□□□□ -0.4
DNMT1-203ENST00000540357 EIF3FO00303 357 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-203ENST00000540357 MTHFD2P13995 350 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 CD1EP15812 388 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 SSR2P43308 183 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 RFX3P48380 749 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 SREBF2Q12772 1141 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 GRB14Q14449 540 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 RGNQ15493 299 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 CCDC157Q569K6 752 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 MARCH8Q5T0T0 291 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 KDM4DQ6B0I6 523 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 PAMR1Q6UXH9 720 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 RAET1EQ8TD07 263 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 TMEM40Q8WWA1 233 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 HRASLS5Q96KN8 279 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 KLHL31Q9H511 634 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 COMMD9Q9P000 198 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 MAB21L2Q9Y586 359 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 A0A1W2PQL4 384 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-203ENST00000540357 DRGXA6NNA5 263 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 ANKRD28O15084 1053 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 CAPN5O15484 640 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-203ENST00000540357 ANXA3P12429 323 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 UQCRC2P22695 453 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 CDK10Q15131 360 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 LIN54Q6MZP7 749 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 AGMOQ6ZNB7 445 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 MBOAT1Q6ZNC8 495 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 TPRG1Q6ZUI0 275 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 FAM220AQ7Z4H9 259 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 TMEM151AQ8N4L1 468 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 TEX26Q8N6G2 289 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 RFT1Q96AA3 541 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 YIPF6Q96EC8 236 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 GABARAPL1Q9H0R8 117 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 OSGEPL1Q9H4B0 414 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 NEUROD4Q9HD90 331 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 TMLHEQ9NVH6 421 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 UCKL1Q9NWZ5 548 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 UBQLN2Q9UHD9 624 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 BTNL2Q9UIR0 455 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 MANSC4A6NHS7 340 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-203ENST00000540357 DGKEP52429 567 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 RGS8P57771 180 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-203ENST00000540357 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.53□□□□□ -0.4
DNMT1-203ENST00000540357 SNAP47Q5SQN1 464 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 AGTRAPQ6RW13 159 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 PHYKPLQ8IUZ5 450 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 MDGA1Q8NFP4 955 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 DUSP21Q9H596 190 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 ENAMQ9NRM1 1142 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 INIPQ9NRY2 104 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 IRAK3Q9Y616 596 aa12.53□□□□□ -0.4
DNMT1-203ENST00000540357 KMOO15229 486 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 ASGR1P07306 291 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 SDC1P18827 310 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 DDOSTP39656 456 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 XAF1Q6GPH4 301 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 CLECL1Q8IZS7 167 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 TNFRSF10DQ9UBN6 386 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 PCDHGB1Q9Y5G3 927 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 M0QZQ0 153 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 PRKYO43930 277 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 IFNA16P05015 189 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 TRAPPC2P0DI81 140 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 TRAPPC2BP0DI82 140 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 TIA1P31483 386 aaKnown RBP eCLIP12.52□□□□□ -0.46e-7■■■■□ 22.6
DNMT1-203ENST00000540357 CNR2P34972 360 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 RPS13P62277 151 aaKnown RBP12.52□□□□□ -0.4
DNMT1-203ENST00000540357 CTSL3PQ5NE16 218 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 NCEH1Q6PIU2 408 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 NRARPQ7Z6K4 114 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 DEFB132Q7Z7B7 95 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 GPR151Q8TDV0 419 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 APIPQ96GX9 242 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 SUV39H2Q9H5I1 410 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 OSGIN1Q9UJX0 560 aa12.52□□□□□ -0.4
DNMT1-203ENST00000540357 DAPL1A0PJW8 107 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 MBLAC1A4D2B0 266 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-203ENST00000540357 PI15O43692 258 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 SOCS5O75159 536 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 ADORA3P0DMS8 318 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 CFL1P23528 166 aaKnown RBP12.52□□□□□ -0.41
DNMT1-203ENST00000540357 CDH11P55287 796 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 FPGSQ05932 587 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 CTF1Q16619 201 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 C9orf64Q5T6V5 341 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF598Q86UK7 904 aaKnown RBP12.52□□□□□ -0.41
DNMT1-203ENST00000540357 PIANPQ8IYJ0 282 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 LINC01465Q8N7H1 131 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 ACOT12Q8WYK0 555 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 SLC9A6Q92581 669 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF300Q96RE9 604 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-203ENST00000540357 ACPTQ9BZG2 426 aa12.52□□□□□ -0.41
DNMT1-203ENST00000540357 MKRN2Q9H000 416 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms