RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PRMT3O60678 531 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 CHRM5P08912 532 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-205ENST00000538545 POU3F3P20264 500 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-205ENST00000538545 AKT2P31751 481 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 TRPC1P48995 793 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 VAC14Q08AM6 782 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 HYAL2Q12891 473 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 SLC5A12Q1EHB4 618 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 OLIG3Q7RTU3 272 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 UBE2E3Q969T4 207 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 REXO5Q96IC2 774 aaKnown RBP13.46□□□□□ -0.25
ACTN1-205ENST00000538545 RHBGQ9H310 441 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 MUC13Q9H3R2 512 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 ANKRA2Q9H9E1 313 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 PELI2Q9HAT8 420 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 SMURF2Q9HAU4 748 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 VNN3Q9NY84 501 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 GSAPA4D1B5 854 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 LRIT2A6NDA9 550 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 DNAJB6O75190 326 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 CST1P01037 141 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 THEGLP0DJG4 465 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 C8orf89P0DMQ9 161 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 RAP2AP10114 183 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 GPX2P18283 190 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 DGKEP52429 567 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 MVDP53602 400 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 RGNQ15493 299 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 ATP6AP1Q15904 470 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 VMACQ2NL98 169 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 FAM98BQ52LJ0 330 aaKnown RBP13.46□□□□□ -0.25
ACTN1-205ENST00000538545 PPP4R4Q6NUP7 873 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 RNF130Q86XS8 419 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 TMEM126BQ8IUX1 230 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 SLC44A2Q8IWA5 706 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-205ENST00000538545 TMEFF1Q8IYR6 380 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 RAB42Q8N4Z0 105 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 TPD52L3Q96J77 140 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 MAGED4Q96JG8 741 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 PRPF18Q99633 342 aaKnown RBP13.46□□□□□ -0.25
ACTN1-205ENST00000538545 SRMSQ9H3Y6 488 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 CXorf36Q9H7Y0 433 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 POLMQ9NP87 494 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-205ENST00000538545 MYNNQ9NPC7 610 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 ABCG2Q9UNQ0 655 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 PCDH15Q96QU1 1955 aa13.46□□□□□ -0.26
ACTN1-205ENST00000538545 LRP4O75096 1905 aa13.46□□□□□ -0.26
ACTN1-205ENST00000538545 A0A1W2PRB8 838 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 STK25O00506 426 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 ATP6V1B1P15313 513 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 SSR2P43308 183 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 PHEXP78562 749 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 EIF2B5Q13144 721 aaKnown RBP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 FZD5Q13467 585 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 SMAD2Q15796 467 aaKnown RBP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 NHSL2Q5HYW2 709 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 GPR153Q6NV75 609 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 ABRAXAS1Q6UWZ7 409 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 GPR155Q7Z3F1 870 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 SZRD1Q7Z422 152 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 STK32CQ86UX6 486 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 PAPD5Q8NDF8 572 aaKnown RBP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 CATSPER1Q8NEC5 780 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 VPS37AQ8NEZ2 397 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 TSTD1Q8NFU3 115 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 DOK4Q8TEW6 326 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 CYGBQ8WWM9 190 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 CDX2Q99626 313 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 VCXQ9H320 206 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 MVB12BQ9H7P6 319 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 WSB2Q9NYS7 404 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 ATP6V1HQ9UI12 483 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 SCOCQ9UIL1 159 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 FBXW2Q9UKT8 454 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 OR6C74A6NCV1 312 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 F3P13726 295 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 HSD17B2P37059 387 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 SPATS1Q496A3 300 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 OR52E8Q6IFG1 317 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 HMGN2P46Q86SG4 172 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 KIR3DX1Q9H7L2 352 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 TMEM74BQ9NUR3 256 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 APOBEC3BQ9UH17 382 aaKnown RBP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 A0A0J9YVX5 310 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 A6NCN8 305 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 FAM170BA6NMN3 283 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 RNASET2O00584 256 aaKnown RBP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 DENRO43583 198 aaKnown RBP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 GCM2O75603 506 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 UMPSP11172 480 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 TYRP1P17643 537 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 FUT4P22083 530 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 CERS1P27544 350 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 MRPS35P82673 323 aaKnown RBP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 PDE7AQ13946 482 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 FOXB2Q5VYV0 432 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.45□□□□□ -0.26
ACTN1-205ENST00000538545 HLA-CQ95604 372 aa13.45□□□□□ -0.26
ACTN1-205ENST00000538545 NR1H4Q96RI1 486 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms