RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	SEC24D	O94855	1032 aa	Predicted RBP	10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	ZIC2	O95409	532 aa	Predicted RBP	10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	SNRPA	P09012	282 aa	Known RBP	10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	C8orf89	P0DMQ9	161 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	EPB42	P16452	691 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	CXCR2	P25025	360 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	CNTF	P26441	200 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	EEF1D	P29692	281 aa	Known RBP	10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	CASP2	P42575	452 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	PLA2G16	P53816	162 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	VSNL1	P62760	191 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	BTG2	P78543	158 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	TBCC	Q15814	346 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	IGFBP7	Q16270	282 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	PRR30	Q53SZ7	412 aa	Predicted RBP	10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	VWA5B1	Q5TIE3	1220 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	KLC3	Q6P597	504 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	NDUFAF7	Q7L592	441 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	GOLGA7	Q7Z5G4	137 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	UBE3D	Q7Z6J8	389 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	ANKRD37	Q7Z713	158 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	CA13	Q8N1Q1	262 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296		Q8NA96	180 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	PSMF1	Q92530	271 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	GAL3ST3	Q96A11	431 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	QRFPR	Q96P65	431 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	CDK15	Q96Q40	435 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	WDR77	Q9BQA1	342 aa	Predicted RBP	10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	EFCAB11	Q9BUY7	163 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	ZNF700	Q9H0M5	742 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	TMEM216	Q9P0N5	145 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296	ZNF451	Q9Y4E5	1061 aa		10.21	□□□□□ -0.78
LDHA-215	ENST00000537296		A0A1B0GTL3	188 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296		A0A1W2PPM1	405 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	SAP18	O00422	153 aa	Known RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	RTCA	O00442	366 aa	Known RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	OR7A17	O14581	309 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	CLEC3A	O75596	197 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	TUBB	P07437	444 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	FH	P07954	510 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	PRR35	P0CG20	571 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	PCNA	P12004	261 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	MAOA	P21397	527 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	CERS1	P27544	350 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	TNFRSF8	P28908	595 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	SLCO1A2	P46721	670 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	PIK3CG	P48736	1102 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	HNRNPF	P52597	415 aa	Known RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	STXBP1	P61764	594 aa	Known RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	GTF2H2	Q13888	395 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	ABRAXAS2	Q15018	415 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	PCBP2	Q15366	365 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	ADPRM	Q3LIE5	342 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	SLC6A19	Q695T7	634 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	JMJD6	Q6NYC1	403 aa	Predicted RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	GTF2H2C	Q6P1K8	395 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	TIFAB	Q6ZNK6	161 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	CPEB2	Q7Z5Q1	589 aa	Known RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	MYLK4	Q86YV6	388 aa	Predicted RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	SIRT6	Q8N6T7	355 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	TMEM52	Q8NDY8	209 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	OR7G3	Q8NG95	312 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	OR52B6	Q8NGF0	335 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	BRIX1	Q8TDN6	353 aa	Known RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	ZNF473	Q8WTR7	871 aa	Known RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	TBC1D20	Q96BZ9	403 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	IMMP1L	Q96LU5	166 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	SORBS1	Q9BX66	1292 aa	Known RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	REXO4	Q9GZR2	422 aa	Known RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	LHPP	Q9H008	270 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	IPPK	Q9H8X2	491 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	ZBTB26	Q9HCK0	441 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	PLAA	Q9Y263	795 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	RNF11	Q9Y3C5	154 aa		10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	UBR5	O95071	2799 aa	Predicted RBP	10.2	□□□□□ -0.78
LDHA-215	ENST00000537296	COL12A1	Q99715	3063 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	URAD	A6NGE7	173 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	SMIM23	A6NLE4	172 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	TGFBR3L	H3BV60	316 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	PPP6C	O00743	305 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	SORBS2	O94875	1100 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	TGFB1	P01137	390 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	RBP1	P09455	135 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	ITGAM	P11215	1152 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	COL6A2	P12110	1019 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	TSPAN8	P19075	237 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	ST13	P50502	369 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	PCDH1	Q08174	1060 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	DDX39B	Q13838	428 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	NSDHL	Q15738	373 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	PLEKHN1	Q494U1	663 aa	Predicted RBP	10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	PAGE2B	Q5JRK9	111 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	GRHL2	Q6ISB3	625 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	MED27	Q6P2C8	311 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	ABHD17C	Q6PCB6	329 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	ZNF793	Q6ZN11	406 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	LINC00696	Q6ZRV3	163 aa		10.19	□□□□□ -0.78
LDHA-215	ENST00000537296	KBTBD2	Q8IY47	623 aa		10.19	□□□□□ -0.78

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