RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CDC123O75794 336 aaPredicted RBP16.88■□□□□ 0.29
DDX55-204ENST00000536079 CD63P08962 238 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 CERS1P27544 350 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 ALDH3A1P30838 453 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 EMP2P54851 167 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 DNAJB13P59910 316 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 MPP2Q14168 576 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 LY6DQ14210 128 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 GGTA1PQ4G0N0 100 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 SGO1Q5FBB7 561 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 DEPDC1Q5TB30 811 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 THAP4Q8WY91 577 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 CATSPER2Q96P56 530 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 KCNA7Q96RP8 456 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 SMC6Q96SB8 1091 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 ZNF382Q96SR6 550 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 P4HTMQ9NXG6 502 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 NXT1Q9UKK6 140 aaKnown RBP16.88■□□□□ 0.29
DDX55-204ENST00000536079 MKL2Q9ULH7 1088 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 IGSF10Q6WRI0 2623 aa16.88■□□□□ 0.29
DDX55-204ENST00000536079 URADA6NGE7 173 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 ERVH48-1M5A8F1 160 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 OTCP00480 354 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 PIK3CBP42338 1070 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 POLE2P56282 527 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 CASP8Q14790 479 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 SOWAHCQ53LP3 525 aaPredicted RBP16.87■□□□□ 0.29
DDX55-204ENST00000536079 KHDRBS2Q5VWX1 349 aaKnown RBP16.87■□□□□ 0.29
DDX55-204ENST00000536079 ATG14Q6ZNE5 492 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 RAB43Q86YS6 212 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 CDYL2Q8N8U2 506 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 TMEM52Q8NDY8 209 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 MYRIPQ8NFW9 859 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 RDH11Q8TC12 318 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 APOBEC4Q8WW27 367 aaKnown RBP16.87■□□□□ 0.29
DDX55-204ENST00000536079 CMTM7Q96FZ5 175 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 GATA5Q9BWX5 397 aaPredicted RBP16.87■□□□□ 0.29
DDX55-204ENST00000536079 ZNF717Q9BY31 904 aaPredicted RBP16.87■□□□□ 0.29
DDX55-204ENST00000536079 C14orf105Q9NVL8 296 aa16.87■□□□□ 0.29
DDX55-204ENST00000536079 K7EM74 188 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 AGPSO00116 658 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 PLPP1O14494 284 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 HEXBP07686 556 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 H2AFXP16104 143 aaPredicted RBP16.86■□□□□ 0.29
DDX55-204ENST00000536079 ATP5A1P25705 553 aaKnown RBP16.86■□□□□ 0.29
DDX55-204ENST00000536079 ETV4P43268 484 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 HTR6P50406 440 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 HNRNPFP52597 415 aaKnown RBP16.86■□□□□ 0.29
DDX55-204ENST00000536079 FOXA1P55317 472 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 BTG2P78543 158 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 RHAGQ02094 409 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 FRG2Q64ET8 278 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 TRIM40Q6P9F5 258 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 FRMD7Q6ZUT3 714 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 LANCL3Q6ZV70 420 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 GPRIN3Q6ZVF9 776 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 OR11G2Q8NGC1 345 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 AGAP11Q8TF27 550 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 TSLPQ969D9 159 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 PGM2Q96G03 612 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 FAR2Q96K12 515 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 FRG2BQ96QU4 278 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 UBL7Q96S82 380 aaPredicted RBP16.86■□□□□ 0.29
DDX55-204ENST00000536079 CSF3RQ99062 836 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 HBEGFQ99075 208 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 SHCBP1LQ9BZQ2 653 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 ING2Q9H160 280 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 PRM3Q9NNZ6 103 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 SEMA3GQ9NS98 782 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 FBXL4Q9UKA2 621 aa16.86■□□□□ 0.29
DDX55-204ENST00000536079 IGHV3-20A0A0C4DH32 117 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 FOXE1O00358 373 aaPredicted RBP16.85■□□□□ 0.29
DDX55-204ENST00000536079 MANBAO00462 879 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 B4GALT2O60909 372 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 EEDO75530 441 aaKnown RBP16.85■□□□□ 0.29
DDX55-204ENST00000536079 PDYNP01213 254 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 FHP07954 510 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 CHN1P15882 459 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 SERPINB1P30740 379 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 EEF1A2Q05639 463 aaKnown RBP16.85■□□□□ 0.29
DDX55-204ENST00000536079 Q0VFX4 171 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 LCP2Q13094 533 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 MINDY4Q4G0A6 757 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 TMEM35AQ53FP2 167 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 MFSD4BQ5TF39 518 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 LIPMQ5VYY2 423 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 CES4AQ5XG92 561 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 TTC19Q6DKK2 380 aaPredicted RBP16.85■□□□□ 0.29
DDX55-204ENST00000536079 TMEM205Q6UW68 189 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 APLFQ8IW19 511 aaPredicted RBP16.85■□□□□ 0.29
DDX55-204ENST00000536079 TBC1D20Q96BZ9 403 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 CCDC126Q96EE4 140 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 MAPKAP1Q9BPZ7 522 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 IQCGQ9H095 443 aaKnown RBP16.85■□□□□ 0.29
DDX55-204ENST00000536079 TMBIM4Q9HC24 238 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 KCMF1Q9P0J7 381 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 TRPS1Q9UHF7 1281 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 ADGRE2Q9UHX3 823 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 TIMM22Q9Y584 194 aa16.85■□□□□ 0.29
DDX55-204ENST00000536079 A6NL46 340 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms