RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PDK4Q16654 411 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 NDUFA9Q16795 377 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 PFKFB4Q16877 469 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 TSNAXIP1Q2TAA8 658 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 XKR6Q5GH73 641 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 PRMT9Q6P2P2 845 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 NXPE4Q6UWF7 544 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 GFRALQ6UXV0 394 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 NDUFAF7Q7L592 441 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 GDF7Q7Z4P5 450 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 ASPGQ86U10 573 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 MYLK4Q86YV6 388 aaPredicted RBP8.23□□□□□ -1.09
COPB1-210ENST00000533533 PLD6Q8N2A8 252 aaKnown RBP8.23□□□□□ -1.09
COPB1-210ENST00000533533 CAMKVQ8NCB2 501 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 PDPRQ8NCN5 879 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 BRIX1Q8TDN6 353 aaKnown RBP8.23□□□□□ -1.09
COPB1-210ENST00000533533 EPS8L3Q8TE67 593 aaKnown RBP8.23□□□□□ -1.09
COPB1-210ENST00000533533 SLC13A3Q8WWT9 602 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 CCT6BQ92526 530 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 HAS2Q92819 552 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 MIEF2Q96C03 454 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 CCDC120Q96HB5 630 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 OR2A5Q96R48 311 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 ATOH8Q96SQ7 321 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 AIF1LQ9BQI0 150 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 TMEM79Q9BSE2 394 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 PARD6BQ9BYG5 372 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 EPB41L4BQ9H329 900 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 PTGFRNQ9P2B2 879 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 OPTCQ9UBM4 332 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 SUCOQ9UBS9 1254 aaKnown RBP8.23□□□□□ -1.09
COPB1-210ENST00000533533 RUVBL1Q9Y265 456 aaKnown RBP8.23□□□□□ -1.09
COPB1-210ENST00000533533 ACANP16112 2415 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 AKAP9Q99996 3911 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 ABCA4P78363 2273 aa8.23□□□□□ -1.09
COPB1-210ENST00000533533 NIPBLQ6KC79 2804 aaeCLIP8.22□□□□□ -1.093e-11■■■■□ 20
COPB1-210ENST00000533533 IGLV3-12A0A075B6K2 115 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 A0A0A6YYC8 382 aaPredicted RBP8.22□□□□□ -1.09
COPB1-210ENST00000533533 TRGV8A0A0C4DH27 118 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 A0A1W2PQ72 361 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 TRBC2A0A5B9 178 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 I3L1I5 382 aaPredicted RBP8.22□□□□□ -1.09
COPB1-210ENST00000533533 CCL21O00585 134 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 FFAR3O14843 346 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 GPR42O15529 346 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 P2RX6O15547 441 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 NDUFS4O43181 175 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 SMIM24O75264 130 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 UNC5CO95185 931 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 SERPINA7P05543 415 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 RBP1P09455 135 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 SLC35G6P0C7Q6 338 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 C1GALT1C1LP0DN25 315 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 COL6A2P12110 1019 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 FBLP22087 321 aaKnown RBP8.22□□□□□ -1.09
COPB1-210ENST00000533533 CXCR2P25025 360 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 HTR1EP28566 365 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 PTGER4P35408 488 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 HNF4AP41235 474 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 SLC6A12P48065 614 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 IRF8Q02556 426 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 SLBPQ14493 270 aaKnown RBP eCLIP8.22□□□□□ -1.09
COPB1-210ENST00000533533 ZNF630Q2M218 657 aaPredicted RBP8.22□□□□□ -1.09
COPB1-210ENST00000533533 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.22□□□□□ -1.093e-6■■□□□ 14.3
COPB1-210ENST00000533533 VWA2Q5GFL6 755 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 TECRLQ5HYJ1 363 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 CDKL4Q5MAI5 379 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 WDR93Q6P2C0 686 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 EMBQ6PCB8 327 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 RPTNQ6XPR3 784 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 BNC2Q6ZN30 1099 aaPredicted RBP8.22□□□□□ -1.09
COPB1-210ENST00000533533 LRRC70Q7Z2Q7 622 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 MRGPRGQ86SM5 289 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 LAPTM4BQ86VI4 370 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 KRT78Q8N1N4 520 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 ZNF808Q8N4W9 903 aaPredicted RBP8.22□□□□□ -1.09
COPB1-210ENST00000533533 SIRT6Q8N6T7 355 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 TEX9Q8N6V9 391 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 PTGR2Q8N8N7 351 aaPredicted RBP8.22□□□□□ -1.09
COPB1-210ENST00000533533 MFSD9Q8NBP5 474 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 ZNF740Q8NDX6 193 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 ABHD11Q8NFV4 315 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 OR2W6PQ8NHA6 318 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 RHEBL1Q8TAI7 183 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 PHF21BQ96EK2 531 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 THAP11Q96EK4 314 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 MMABQ96EY8 250 aaPredicted RBP8.22□□□□□ -1.09
COPB1-210ENST00000533533 LURAP1Q96LR2 239 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 CAPS2Q9BXY5 557 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 CD244Q9BZW8 370 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.22□□□□□ -1.092e-11■■■■□ 22.6
COPB1-210ENST00000533533 SPNS1Q9H2V7 528 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 SYNPO2LQ9H987 977 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 PELI2Q9HAT8 420 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 CHST11Q9NPF2 352 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 XPR1Q9UBH6 696 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 PTBP2Q9UKA9 531 aaKnown RBP8.22□□□□□ -1.09
COPB1-210ENST00000533533 CDC14AQ9UNH5 594 aa8.22□□□□□ -1.09
COPB1-210ENST00000533533 MRPS2Q9Y399 296 aaKnown RBP8.22□□□□□ -1.09
COPB1-210ENST00000533533 ANKHD1Q8IWZ3 2542 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms