RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 BANPQ8N9N5 519 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 FDCSPQ8NFU4 85 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 OR4F6Q8NGB9 312 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 CCT6BQ92526 530 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 TBC1D20Q96BZ9 403 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 L3HYPDHQ96EM0 354 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 FER1L6-AS2Q96M78 137 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 OR1F2PQ96R84 312 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 WDR77Q9BQA1 342 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 ZNF717Q9BY31 904 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 OR51B5Q9H339 312 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 SEMA4BQ9NPR2 832 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 DMRT3Q9NQL9 472 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 MKS1Q9NXB0 559 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 KCMF1Q9P0J7 381 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 MKL2Q9ULH7 1088 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 GRID1Q9ULK0 1009 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 PPT2Q9UMR5 302 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 PCDHGA9Q9Y5G4 932 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 PCDHGA11Q9Y5H2 935 aa13.14□□□□□ -0.31
TSPAN4-220ENST00000532375 CNTRLQ7Z7A1 2325 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 IGHV1-45A0A0A0MS14 117 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 MAGEB17A8MXT2 336 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 RTCAO00442 366 aaKnown RBP13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 PEX12O00623 359 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 ALOX12BO75342 701 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 HEXBP07686 556 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 FHP07954 510 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 CYC1P08574 325 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 SFTPCP11686 197 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 TAC1P20366 129 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 NR1D1P20393 614 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 SERPINB1P30740 379 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 CCT5P48643 541 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 NEK2P51955 445 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 PLA2G16P53816 162 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 RRADP55042 308 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 CLCQ05315 142 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 ZNF844Q08AG5 666 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 TMEM35AQ53FP2 167 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 TNFAIP8L3Q5GJ75 292 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 KHDRBS2Q5VWX1 349 aaKnown RBP13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 LETMD1Q6P1Q0 360 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 ZYG11AQ6WRX3 759 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 LANCL3Q6ZV70 420 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 TMEM52Q8NDY8 209 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 CMTM7Q96FZ5 175 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 IMMP1LQ96LU5 166 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 MTERF1Q99551 399 aaKnown RBP13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 NUDT9Q9BW91 350 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 NPLQ9BXD5 320 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 ZNF700Q9H0M5 742 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 GSTO2Q9H4Y5 243 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 ZNF552Q9H707 407 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 ADGRE2Q9UHX3 823 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 TP53TG5Q9Y2B4 290 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 SPTA1P02549 2419 aa13.13□□□□□ -0.31
TSPAN4-220ENST00000532375 IGKV3D-11A0A0A0MRZ8 115 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 MKRN2OSH3BPM6 223 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 FOXE1O00358 373 aaPredicted RBP13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 CYR61O00622 381 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 COPEO14579 308 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 PCDH17O14917 1159 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 SH3BGRLO75368 114 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 SUPT7LO94864 414 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 PCNAP12004 261 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 ACPPP15309 386 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 ATP5A1P25705 553 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 CERS1P27544 350 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 CCNG1P51959 295 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 HNRNPFP52597 415 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 RPS13P62277 151 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 BTG2P78543 158 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 TUBB8Q3ZCM7 444 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 CCDC153Q494R4 210 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 FAAH2Q6GMR7 532 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 TRIM40Q6P9F5 258 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 NDUFAF7Q7L592 441 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 ANKRD37Q7Z713 158 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 SLC22A9Q8IVM8 553 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 GALNT16Q8N428 558 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 MYRIPQ8NFW9 859 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 C9orf43Q8TAL5 461 aaPredicted RBP13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 TRPC4APQ8TEL6 797 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 PSMF1Q92530 271 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 TSLPQ969D9 159 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 SERINC2Q96SA4 455 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 SMAD5Q99717 465 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 TBCDQ9BTW9 1192 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 SORBS1Q9BX66 1292 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 RBCK1Q9BYM8 510 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 ATP13A2Q9NQ11 1180 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 ZNF71Q9NQZ8 489 aaPredicted RBP13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 DAPP1Q9UN19 280 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 PLLPQ9Y342 182 aa13.12□□□□□ -0.31
TSPAN4-220ENST00000532375 IGHV3-20A0A0C4DH32 117 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 A6NL46 340 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 TGFBR3LH3BV60 316 aa13.11□□□□□ -0.31
TSPAN4-220ENST00000532375 SAP18O00422 153 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms