RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 SCUBE1Q8IWY4 988 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 CENPLQ8N0S6 344 aaPredicted RBP11.32□□□□□ -0.6
COPB1-206ENST00000529210 CA13Q8N1Q1 262 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 BCORP1Q8N888 145 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 OR2L5Q8NG80 312 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 OR1N1Q8NGS0 311 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 DNAJB8Q8NHS0 232 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 ISL2Q96A47 359 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 QRFPRQ96P65 431 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 UNKQ9C0B0 810 aaKnown RBP11.32□□□□□ -0.6
COPB1-206ENST00000529210 ACSS3Q9H6R3 686 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 PRDM9Q9NQV7 894 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 PLA2G3Q9NZ20 509 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 STMN3Q9NZ72 180 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 CD274Q9NZQ7 290 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 MAP10Q9P2G4 905 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 ZNF490Q9ULM2 529 aaPredicted RBP11.32□□□□□ -0.6
COPB1-206ENST00000529210 PPIEQ9UNP9 301 aaKnown RBP11.32□□□□□ -0.6
COPB1-206ENST00000529210 ACOT9Q9Y305 439 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 TSC22D4Q9Y3Q8 395 aa11.32□□□□□ -0.6
COPB1-206ENST00000529210 UTP20O75691 2785 aaKnown RBP11.31□□□□□ -0.6
COPB1-206ENST00000529210 BLACEA4D250 179 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 ANKDD1BA6NHY2 528 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 SAGE2PA6NJ88 616 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 SYCE1LA8MT33 242 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 KIF2AO00139 706 aaPredicted RBP11.31□□□□□ -0.6
COPB1-206ENST00000529210 KLK8O60259 260 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 PRAMEF2O60811 474 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 CDC123O75794 336 aaPredicted RBP11.31□□□□□ -0.6
COPB1-206ENST00000529210 URI1O94763 535 aaPredicted RBP11.31□□□□□ -0.6
COPB1-206ENST00000529210 B3GALT4O96024 378 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 LDLRP01130 860 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 SERPINB1P30740 379 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 PHBP35232 272 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 TDGF1P3P51864 188 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 HSD17B7P56937 341 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 OLR1P78380 273 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 DOC2AQ14183 400 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 ELOAQ14241 798 aaKnown RBP11.31□□□□□ -0.6
COPB1-206ENST00000529210 SLMAPQ14BN4 828 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 EFTUD2Q15029 972 aaKnown RBP eCLIP11.31□□□□□ -0.61e-8■■■■□ 22.8
COPB1-206ENST00000529210 ACAP2Q15057 778 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 MEP1AQ16819 746 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 FAM83EQ2M2I3 478 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 PAGE2BQ5JRK9 111 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 ABHD17CQ6PCB6 329 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 RAPH1Q70E73 1250 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 LAS2Q8IYD9 372 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 SLC5A8Q8N695 610 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 SRFBP1Q8NEF9 429 aaKnown RBP11.31□□□□□ -0.6
COPB1-206ENST00000529210 MNS1Q8NEH6 495 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 NFAM1Q8NET5 270 aaPredicted RBP11.31□□□□□ -0.6
COPB1-206ENST00000529210 NR4A3Q92570 626 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 UBE2E3Q969T4 207 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 PTCHD1Q96NR3 888 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 TAAR6Q96RI8 345 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 NPAS2Q99743 824 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 RBCK1Q9BYM8 510 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 REXO4Q9GZR2 422 aaKnown RBP11.31□□□□□ -0.6
COPB1-206ENST00000529210 ALG9Q9H6U8 611 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 TRIM45Q9H8W5 580 aaPredicted RBP11.31□□□□□ -0.6
COPB1-206ENST00000529210 ABI3Q9P2A4 366 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 MTRF1LQ9UGC7 380 aaKnown RBP11.31□□□□□ -0.6
COPB1-206ENST00000529210 DMGDHQ9UI17 866 aaKnown RBP11.31□□□□□ -0.6
COPB1-206ENST00000529210 SLC5A6Q9Y289 635 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 ASB1Q9Y576 335 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 CLDN16Q9Y5I7 305 aa11.31□□□□□ -0.6
COPB1-206ENST00000529210 ZGRF1Q86YA3 2104 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 NAV2Q8IVL1 2488 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 K7EPI3 171 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 PSMD12O00232 456 aaPredicted RBP11.3□□□□□ -0.6
COPB1-206ENST00000529210 ERI3O43414 337 aaKnown RBP11.3□□□□□ -0.6
COPB1-206ENST00000529210 SCELO95171 688 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 ALDOAP04075 364 aaKnown RBP11.3□□□□□ -0.6
COPB1-206ENST00000529210 S100BP04271 92 aaPredicted RBP11.3□□□□□ -0.6
COPB1-206ENST00000529210 C2P06681 752 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 ECHS1P30084 290 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 MAGEA12P43365 314 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 ARFIP1P53367 373 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 RAB38P57729 211 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 BTN3A2P78410 334 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 BTG2P78543 158 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 IRF8Q02556 426 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 ZNF33BQ06732 778 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 ACTN3Q08043 901 aaPredicted RBP11.3□□□□□ -0.6
COPB1-206ENST00000529210 RUNX2Q13950 521 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 NAA30Q147X3 362 aaPredicted RBP11.3□□□□□ -0.6
COPB1-206ENST00000529210 HIST2H2ACQ16777 129 aaPredicted RBP11.3□□□□□ -0.6
COPB1-206ENST00000529210 XKR6Q5GH73 641 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 HIST2H2AA3Q6FI13 130 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 TRIM40Q6P9F5 258 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 CRLF3Q8IUI8 442 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 ZNF595Q8IYB9 648 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 AMER2Q8N7J2 671 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 MDS2Q8NDY4 140 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 C7orf57Q8NEG2 295 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 ARMC2Q8NEN0 867 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 SUN3Q8TAQ9 357 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
COPB1-206ENST00000529210 ZNF473Q8WTR7 871 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms