RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ZNF460Q14592 562 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 KRTCAP3Q53RY4 240 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 HIST2H2BCQ6DN03 193 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 SULT1C3Q6IMI6 304 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 SLCO4C1Q6ZQN7 724 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 C3orf62Q6ZUJ4 267 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 RPS19BP1Q86WX3 136 aaKnown RBP13.32□□□□□ -0.28
CAPN1-212ENST00000527887 GPSM1Q86YR5 675 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 CEP97Q8IW35 865 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 FAM98AQ8NCA5 519 aaKnown RBP13.32□□□□□ -0.28
CAPN1-212ENST00000527887 MDS2Q8NDY4 140 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 ADAMTS18Q8TE60 1221 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 TSLPQ969D9 159 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 GAL3ST3Q96A11 431 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 SCMH1Q96GD3 660 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 FAR2Q96K12 515 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 GPR22Q99680 433 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 FUT8Q9BYC5 575 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 RBCK1Q9BYM8 510 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 SAYSD1Q9NPB0 183 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 SUCOQ9UBS9 1254 aaKnown RBP13.32□□□□□ -0.28
CAPN1-212ENST00000527887 NFU1Q9UMS0 254 aa13.32□□□□□ -0.28
CAPN1-212ENST00000527887 IGKV3D-11A0A0A0MRZ8 115 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 ASPDHA6ND91 283 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 ANKDD1BA6NHY2 528 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 SAGE2PA6NJ88 616 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 CLGNO14967 610 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 CLEC3AO75596 197 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 WISP3O95389 354 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-212ENST00000527887 CCDC166P0CW27 439 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 EEF1DP29692 281 aaKnown RBP13.31□□□□□ -0.28
CAPN1-212ENST00000527887 SSTR1P30872 391 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 SPRP35270 261 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-212ENST00000527887 CASP6P55212 293 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 RCN2Q14257 317 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 SLMAPQ14BN4 828 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 TERF2Q15554 542 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 OR1C1Q15619 314 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 GRTP1Q5TC63 336 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 FCRLBQ6BAA4 426 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 RELL1Q8IUW5 271 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 SHISA5Q8N114 240 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 ARMC10Q8N2F6 343 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 C7orf57Q8NEG2 295 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 THAP3Q8WTV1 239 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-212ENST00000527887 FMO2Q99518 471 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 RBBP8Q99708 897 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 ACBD3Q9H3P7 528 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 KLHL31Q9H511 634 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 TRIM45Q9H8W5 580 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-212ENST00000527887 SMYD2Q9NRG4 433 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 DNAJC11Q9NVH1 559 aa13.31□□□□□ -0.28
CAPN1-212ENST00000527887 MRPS33Q9Y291 106 aaKnown RBP13.31□□□□□ -0.28
CAPN1-212ENST00000527887 MTO1Q9Y2Z2 717 aaKnown RBP13.31□□□□□ -0.28
CAPN1-212ENST00000527887 TCRBV9S1A1TA0A576 114 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 ESYT3A0FGR9 886 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 LRIT2A6NDA9 550 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 FAM159BA6NKW6 160 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 GABRR3A8MPY1 467 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 CLDN4O14493 209 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 DNAJB6O75190 326 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 STK16O75716 305 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 UNC5CO95185 931 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 SP1P08047 785 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 MST1P26927 711 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 DCTP40126 519 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 HNF4AP41235 474 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 GDF5P43026 501 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 HSD17B7P56937 341 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 KCNK10P57789 538 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 OLR1P78380 273 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 BTN3A2P78410 334 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 MRPS25P82663 173 aaKnown RBP13.3□□□□□ -0.28
CAPN1-212ENST00000527887 OC90Q02509 493 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-212ENST00000527887 TGM3Q08188 693 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 NAB1Q13506 487 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 LAPTM5Q13571 262 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 SLBPQ14493 270 aaKnown RBP eCLIP13.3□□□□□ -0.28
CAPN1-212ENST00000527887 ADPRMQ3LIE5 342 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 PAGE2BQ5JRK9 111 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 TOR1AIP1Q5JTV8 583 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 SLC25A25Q6KCM7 469 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 ZDHHC24Q6UX98 284 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 FJX1Q86VR8 437 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 CA13Q8N1Q1 262 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 FBXO25Q8TCJ0 367 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 KIAA1191Q96A73 305 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 MS4A6EQ96DS6 147 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 WDR34Q96EX3 536 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 UBXN10Q96LJ8 280 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 SIGLEC12Q96PQ1 595 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 NPAS2Q99743 824 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 EFCAB11Q9BUY7 163 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 DPH5Q9H2P9 285 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 CDCP1Q9H5V8 836 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 ZNF446Q9NWS9 450 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 WWOXQ9NZC7 414 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 LRFN1Q9P244 771 aa13.3□□□□□ -0.28
CAPN1-212ENST00000527887 CCDC189A1A4V9 331 aa13.29□□□□□ -0.28
CAPN1-212ENST00000527887 CXorf49A8MYA2 514 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms