RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 BFARQ9NZS9 450 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 MTRF1LQ9UGC7 380 aaKnown RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 UTS2RQ9UKP6 389 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 BAG5Q9UL15 447 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 LAMP3Q9UQV4 416 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 PPIL1Q9Y3C6 166 aa4.37□□□□□ -1.71
USP48-211ENST00000526044 V9GYY5 206 aaPredicted RBP4.37□□□□□ -1.71
USP48-211ENST00000526044 CKAP5Q14008 2032 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 PRUNE2Q8WUY3 3088 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 MUC22E2RYF6 1773 aaPredicted RBP4.36□□□□□ -1.71
USP48-211ENST00000526044 A0A0J9YYE9 177 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 TCRBV21S2A2A0A5A6 115 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 TSPAN11A1L157 253 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 TRIM64A6NGJ6 449 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 TRIM64BA6NI03 449 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 A6NLC8 198 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 C2orf81A6NN90 581 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 ZNF814B7Z6K7 855 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 PLK4O00444 970 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 EIF3HO15372 352 aaKnown RBP eCLIP4.36□□□□□ -1.71
USP48-211ENST00000526044 SLC7A4O43246 635 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 ZNF217O75362 1048 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 AVILO75366 819 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 TMEM63AO94886 807 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 APBB3O95704 486 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 TRBC1P01850 177 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 FGF1P05230 155 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 ALPIP09923 528 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 PIRTP0C851 137 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 CKMT1AP12532 417 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 ADRB3P13945 408 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 PSMA3P25788 255 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 AVPR2P30518 371 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 OXTRP30559 389 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 P2RY2P41231 377 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 TPMTP51580 245 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 ARL4CP56559 192 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 PDE1BQ01064 536 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 SEMG2Q02383 582 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 ELP6Q0PNE2 266 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 CNTN1Q12860 1018 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 PDIA2Q13087 525 aaKnown RBP4.36□□□□□ -1.71
USP48-211ENST00000526044 OLIG2Q13516 323 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 SLMAPQ14BN4 828 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 TAF1AQ15573 450 aaPredicted RBP4.36□□□□□ -1.71
USP48-211ENST00000526044 GALNTL6Q49A17 601 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 TTC31Q49AM3 519 aaPredicted RBP4.36□□□□□ -1.71
USP48-211ENST00000526044 FNBP1LQ5T0N5 605 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 FAM205BPQ63HN1 556 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 NEK5Q6P3R8 708 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 CASC4Q6P4E1 433 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 KIAA1324Q6UXG2 1013 aaKnown RBP4.36□□□□□ -1.71
USP48-211ENST00000526044 CENPUQ71F23 418 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 MDGA2Q7Z553 956 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 KBTBD6Q86V97 674 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 ZCCHC9Q8N567 271 aaKnown RBP4.36□□□□□ -1.71
USP48-211ENST00000526044 AADATQ8N5Z0 425 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 FBXO25Q8TCJ0 367 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 BLOC1S5Q8TDH9 187 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 ARRDC3Q96B67 414 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 LRRC39Q96DD0 335 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 ADAD1Q96M93 576 aaKnown RBP4.36□□□□□ -1.71
USP48-211ENST00000526044 SERPINB12Q96P63 405 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 TRIB3Q96RU7 358 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 GPR63Q9BZJ6 419 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 IL22Q9GZX6 179 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 TRABDQ9H4I3 376 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 ANKZF1Q9H8Y5 726 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 SGK2Q9HBY8 427 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 SEMA4BQ9NPR2 832 aaPredicted RBP4.36□□□□□ -1.71
USP48-211ENST00000526044 CHRAC1Q9NRG0 131 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 THSD1Q9NS62 852 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 ZDHHC18Q9NUE0 388 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 DECR2Q9NUI1 292 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 C2orf42Q9NWW7 574 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 MSRB1Q9NZV6 116 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 HACD3Q9P035 362 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 DLGAP2Q9P1A6 1054 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 GPR34Q9UPC5 381 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 FADS3Q9Y5Q0 445 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 MAD1L1Q9Y6D9 718 aa4.36□□□□□ -1.71
USP48-211ENST00000526044 CEP192Q8TEP8 1941 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 C1orf232A0A0U1RR37 186 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 HEATR9A2RTY3 570 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 RGSL1A5PLK6 1076 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 FAM47DPA6NHR8 397 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 HMX3A6NHT5 357 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 LRRC72A6NJI9 287 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 MCIDASD6RGH6 385 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 RHODO00212 210 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 STX7O15400 261 aaKnown RBP4.35□□□□□ -1.71
USP48-211ENST00000526044 HNRNPRO43390 633 aaKnown RBP4.35□□□□□ -1.71
USP48-211ENST00000526044 PAPSS2O95340 614 aaPredicted RBP4.35□□□□□ -1.71
USP48-211ENST00000526044 CLDN7O95471 211 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 TTC4O95801 387 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 WNT1P04628 370 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 TNFRSF8P28908 595 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 HOXA6P31267 233 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 DRD3P35462 400 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 HMGCLP35914 325 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms