RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 OR6A2O95222 327 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 CPNE6O95741 557 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 AK1P00568 194 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 EPOP01588 193 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 KRT8P05787 483 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 IGHV4-38-2P0DP08 117 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 HSPA5P11021 654 aaKnown RBP4.06□□□□□ -1.76
CSDE1-211ENST00000525970 LIFP15018 202 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 GJB2P29033 226 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 NR0B1P51843 470 aaKnown RBP4.06□□□□□ -1.76
CSDE1-211ENST00000525970 SSTP61278 116 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 SP3Q02447 781 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 GABPAQ06546 454 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 FUT7Q11130 342 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 ILF3Q12906 894 aaKnown RBP eCLIP4.06□□□□□ -1.76
CSDE1-211ENST00000525970 DMP1Q13316 513 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-211ENST00000525970 RBM39Q14498 530 aaKnown RBP4.06□□□□□ -1.76
CSDE1-211ENST00000525970 PDIA5Q14554 519 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 IRAK1BP1Q5VVH5 260 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 ZNF776Q68DI1 518 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-211ENST00000525970 OR4C11Q6IEV9 310 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 LCA5Q86VQ0 697 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 NR2C2APQ86WQ0 139 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 ZNF843Q8N446 348 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 DNAJC22Q8N4W6 341 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 RNF149Q8NC42 400 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 FBXO30Q8TB52 745 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 SEPT8Q92599 483 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 GLYATL1Q969I3 302 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 SSX3Q99909 188 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 NACAP1Q9BZK3 213 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 THAP2Q9H0W7 228 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 RWDD1Q9H446 243 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-211ENST00000525970 EGLN3Q9H6Z9 239 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 NDUFA13Q9P0J0 144 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 IL20RAQ9UHF4 553 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 SLC12A6Q9UHW9 1150 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 PILRAQ9UKJ1 303 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 MAN1B1Q9UKM7 699 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 ERVK-19Q9WJR5 959 aa4.06□□□□□ -1.76
CSDE1-211ENST00000525970 TMEM89A2RUT3 159 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 ZNF732B4DXR9 585 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 CHADO15335 359 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 MLNRO43193 412 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 LANCL1O43813 399 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 KIF5CO60282 957 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 GLRA3O75311 464 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 ATP6V1G1O75348 118 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 TSHBP01222 138 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 SFTPBP07988 381 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 SERPINF2P08697 491 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 CT45A8P0DMV1 189 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 CT45A9P0DMV2 189 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 CETPP11597 493 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 ANPEPP15144 967 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 PRDX6P30041 224 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 CETN2P41208 172 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 CCL11P51671 97 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 ZNF132P52740 706 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 GABPB1Q06547 395 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-211ENST00000525970 MFGE8Q08431 387 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-211ENST00000525970 SRSF9Q13242 221 aaKnown RBP eCLIP4.05□□□□□ -1.76
CSDE1-211ENST00000525970 SQLEQ14534 574 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 SPHARQ15513 63 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 CT45A2Q5DJT8 189 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 C9orf50Q5SZB4 431 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 NKAIN2Q5VXU1 208 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 AFTPHQ6ULP2 937 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 FAM159AQ6UWV7 190 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 GSG1LQ6UXU4 331 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 UNQ6126/PRO20091Q6UXV3 157 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 ZNF444Q8N0Y2 327 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-211ENST00000525970 GBP7Q8N8V2 638 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-211ENST00000525970 OR52B4Q8NGK2 314 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 SPATA18Q8TC71 538 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 METTL21AQ8WXB1 218 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 MRPL53Q96EL3 112 aaKnown RBP4.05□□□□□ -1.76
CSDE1-211ENST00000525970 TXN2Q99757 166 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 CCM2Q9BSQ5 444 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 NMNAT2Q9BZQ4 307 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 DCLRE1BQ9H816 532 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 DDX31Q9H8H2 851 aaKnown RBP4.05□□□□□ -1.76
CSDE1-211ENST00000525970 DDX28Q9NUL7 540 aaKnown RBP4.05□□□□□ -1.76
CSDE1-211ENST00000525970 MDFICQ9P1T7 246 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 PLA2G4CQ9UP65 541 aa4.05□□□□□ -1.76
CSDE1-211ENST00000525970 KDRP35968 1356 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 UMODL1Q5DID0 1318 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 A0A087WZY1 265 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 CCDC162PA2VCL2 907 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 IFITM10A6NMD0 228 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 FPGTO14772 594 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 CDK2AP2O75956 126 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 MT-ND2P03891 347 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 ZCCHC18P0CG32 403 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 TPBGLP0DKB5 382 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 MARCKSP29966 332 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-211ENST00000525970 PKLRP30613 574 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 DCTP40126 519 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 HNMTP50135 292 aa4.04□□□□□ -1.76
CSDE1-211ENST00000525970 CCR4P51679 360 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms