RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 PAOXQ6QHF9 649 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 KIAA0408Q6ZU52 694 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 STRA8Q7Z7C7 330 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 PALM2Q8IXS6 379 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 MYO1HQ8N1T3 1032 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 TBC1D19Q8N5T2 526 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 PSD4Q8NDX1 1056 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 OR5M9Q8NGP3 310 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 SNF8Q96H20 258 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 PDLIM2Q96JY6 352 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 OR4K3Q96R72 315 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 NDNQ99608 321 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 SLC6A16Q9GZN6 736 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 ZDHHC11Q9H8X9 412 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 CLK4Q9HAZ1 481 aaKnown RBP12.88□□□□□ -0.35
CSTF3-206ENST00000524827 C20orf96Q9NUD7 363 aaPredicted RBP12.88□□□□□ -0.35
CSTF3-206ENST00000524827 KCMF1Q9P0J7 381 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 ZFP69BQ9UJL9 534 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 ERVK-11Q9UQG0 969 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 L3MBTL1Q9Y468 752 aa12.88□□□□□ -0.35
CSTF3-206ENST00000524827 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.87□□□□□ -0.35
CSTF3-206ENST00000524827 A0A0G2JMM0 328 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 A0A1W2PPB8 328 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 A0A1W2PRS3 328 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 MAGEB16A2A368 324 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 CTAGE15A4D2H0 777 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 SDR42E2A6NKP2 422 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 KIR3DP1A8MWS1 328 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 C4orf51C9J302 202 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 ACOT7O00154 380 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 SLC16A5O15375 505 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 CTAG2O75638 210 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 FGGP02679 453 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 ACVR2AP27037 513 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 AHRP35869 848 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 PPIAP62937 165 aaKnown RBP12.87□□□□□ -0.35
CSTF3-206ENST00000524827 PLGLB1Q02325 96 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 GPS1Q13098 491 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 TERF2Q15554 542 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 CEBPEQ15744 281 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 UGT3A1Q6NUS8 523 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 C16orf47Q6ZP98 133 aaPredicted RBP12.87□□□□□ -0.35
CSTF3-206ENST00000524827 CTAGE6Q86UF2 777 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 LMNTD2Q8IXW0 634 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 CA13Q8N1Q1 262 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 OR2M7Q8NG81 312 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 OR10Q1Q8NGQ4 319 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 OR56A3Q8NH54 315 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 CALML6Q8TD86 181 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 NCLNQ969V3 563 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 LINGO1Q96FE5 620 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 VMP1Q96GC9 406 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 SMC6Q96SB8 1091 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 LIME1Q9H400 295 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 ZNF358Q9NW07 568 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 ST6GALNAC2Q9UJ37 374 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 GUCA1BQ9UMX6 200 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 PPIEQ9UNP9 301 aaKnown RBP12.87□□□□□ -0.35
CSTF3-206ENST00000524827 MMACHCQ9Y4U1 282 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 FAM215AQ9Y5M1 114 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 LIPGQ9Y5X9 500 aa12.87□□□□□ -0.35
CSTF3-206ENST00000524827 FIGNL2A6NMB9 653 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 A8MVJ9 347 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 PRKNO60260 465 aaPredicted RBP12.86□□□□□ -0.35
CSTF3-206ENST00000524827 HIST1H2AGP0C0S8 130 aaPredicted RBP12.86□□□□□ -0.35
CSTF3-206ENST00000524827 SMIM10L1P0DMW3 83 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 GLI4P10075 376 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 MLNP12872 115 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 HIST1H2ADP20671 130 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 PPP2R1BP30154 601 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 REEP5Q00765 189 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 FOXD4Q12950 439 aaPredicted RBP12.86□□□□□ -0.35
CSTF3-206ENST00000524827 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 ZNF585AQ6P3V2 769 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 PAQR3Q6TCH7 311 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 B3GNT6Q6ZMB0 384 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 SCUBE1Q8IWY4 988 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 GPALPP1Q8IXQ4 340 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 ZZZ3Q8IYH5 903 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 AGGF1Q8N302 714 aaeCLIP12.86□□□□□ -0.35
CSTF3-206ENST00000524827 ANKRD53Q8N9V6 530 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 MYRIPQ8NFW9 859 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 CREB3L4Q8TEY5 395 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 MAIP1Q8WWC4 291 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 SLC5A11Q8WWX8 675 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 NEIL2Q969S2 332 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 SMIM10Q96HG1 83 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 HIST1H2AHQ96KK5 128 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 TSNARE1Q96NA8 513 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 SERPINB12Q96P63 405 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 HIST1H2AJQ99878 128 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 TTYH2Q9BSA4 534 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 FAM167BQ9BTA0 163 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 H2AFJQ9BTM1 129 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 POLDIP3Q9BY77 421 aaKnown RBP12.86□□□□□ -0.35
CSTF3-206ENST00000524827 TTTY12Q9BZ98 90 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 GSX1Q9H4S2 264 aaPredicted RBP12.86□□□□□ -0.35
CSTF3-206ENST00000524827 KLHL31Q9H511 634 aa12.86□□□□□ -0.35
CSTF3-206ENST00000524827 XAB2Q9HCS7 855 aaKnown RBP12.86□□□□□ -0.35
CSTF3-206ENST00000524827 PNO1Q9NRX1 252 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms