RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 ICAM2P13598 275 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 PIK3CGP48736 1102 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 CD97P48960 835 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 BTG2P78543 158 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 RHAGQ02094 409 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 PCDH1Q08174 1060 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 DDX39BQ13838 428 aaKnown RBP17.58■□□□□ 0.4
FAM49B-208ENST00000518344 RUNX2Q13950 521 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 E2F2Q14209 437 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 GRHL2Q6ISB3 625 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 JMJD6Q6NYC1 403 aaPredicted RBP17.58■□□□□ 0.4
FAM49B-208ENST00000518344 LINC00696Q6ZRV3 163 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 ZADH2Q8N4Q0 377 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 ZNF473Q8WTR7 871 aaKnown RBP17.58■□□□□ 0.4
FAM49B-208ENST00000518344 TSLPQ969D9 159 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 PTCHD1Q96NR3 888 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 COPS7BQ9H9Q2 264 aaPredicted RBP17.58■□□□□ 0.4
FAM49B-208ENST00000518344 SLAMF7Q9NQ25 335 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 MED13Q9UHV7 2174 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 ZNF462Q96JM2 2506 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 STX16-NPEPL1H3BU86 382 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 STX16O14662 325 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 PRMT3O60678 531 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 SLU7O95391 586 aaKnown RBP17.57■□□□□ 0.4
FAM49B-208ENST00000518344 SLCO1A2P46721 670 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 IGFBP7Q16270 282 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 ADPRMQ3LIE5 342 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 SFT2D3Q587I9 215 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 LIPJQ5W064 366 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 SLC6A19Q695T7 634 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 ABHD17CQ6PCB6 329 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 IGFL3Q6UXB1 125 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 BRIX1Q8TDN6 353 aaKnown RBP17.57■□□□□ 0.4
FAM49B-208ENST00000518344 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.57■□□□□ 0.48e-7■■■■□ 21.1
FAM49B-208ENST00000518344 IMMP1LQ96LU5 166 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 MAGEB10Q96LZ2 347 aaPredicted RBP17.57■□□□□ 0.4
FAM49B-208ENST00000518344 NPLQ9BXD5 320 aaPredicted RBP17.57■□□□□ 0.4
FAM49B-208ENST00000518344 MS4A8Q9BY19 250 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 NOL11Q9H8H0 719 aaKnown RBP17.57■□□□□ 0.4
FAM49B-208ENST00000518344 PTGFRNQ9P2B2 879 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 RNF11Q9Y3C5 154 aa17.57■□□□□ 0.4
FAM49B-208ENST00000518344 TNRC6AQ8NDV7 1962 aaKnown RBP17.57■□□□□ 0.4
FAM49B-208ENST00000518344 TLN1Q9Y490 2541 aaKnown RBP17.56■□□□□ 0.4
FAM49B-208ENST00000518344 SCN3AQ9NY46 2000 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 SMIM23A6NLE4 172 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 MAGEB17A8MXT2 336 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 SAP18O00422 153 aaKnown RBP17.56■□□□□ 0.4
FAM49B-208ENST00000518344 ITGAMP11215 1152 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 PYGBP11216 843 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 CERS1P27544 350 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 SERPINB1P30740 379 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 MTTPP55157 894 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 OR4D2P58180 307 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 CPSF6Q16630 551 aaKnown RBP eCLIP17.56■□□□□ 0.4
FAM49B-208ENST00000518344 BTBD16Q32M84 506 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 PLEKHN1Q494U1 663 aaPredicted RBP17.56■□□□□ 0.4
FAM49B-208ENST00000518344 METTL2BQ6P1Q9 378 aaKnown RBP17.56■□□□□ 0.4
FAM49B-208ENST00000518344 ISLR2Q6UXK2 745 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 CHSY3Q70JA7 882 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 RNF175Q8N4F7 328 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 SIRT6Q8N6T7 355 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 SRFBP1Q8NEF9 429 aaKnown RBP17.56■□□□□ 0.4
FAM49B-208ENST00000518344 HUS1BQ8NHY5 278 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 PNPLA2Q96AD5 504 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 CMTM7Q96FZ5 175 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 QRFPRQ96P65 431 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 CDK15Q96Q40 435 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 SERINC2Q96SA4 455 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 MTERF1Q99551 399 aaKnown RBP17.56■□□□□ 0.4
FAM49B-208ENST00000518344 OR51B5Q9H339 312 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 EPS8L2Q9H6S3 715 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 PRDM7Q9NQW5 492 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 TMEM216Q9P0N5 145 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.56■□□□□ 0.4
FAM49B-208ENST00000518344 ADGRE2Q9UHX3 823 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 PCDHGA11Q9Y5H2 935 aa17.56■□□□□ 0.4
FAM49B-208ENST00000518344 V9GYY5 206 aaPredicted RBP17.56■□□□□ 0.4
FAM49B-208ENST00000518344 A0A1W2PPM1 405 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 A8MUI8 341 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 ESPNB1AK53 854 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 RTCAO00442 366 aaKnown RBP17.55■□□□□ 0.4
FAM49B-208ENST00000518344 OR7A17O14581 309 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 WISP1O95388 367 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 SBK3P0C264 359 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 TAC1P20366 129 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 MAOAP21397 527 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 CCNG1P51959 295 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 VSNL1P62760 191 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 AP2B1P63010 937 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 TMEM35AQ53FP2 167 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 CRB2Q5IJ48 1285 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 PAPD4Q6PIY7 484 aaKnown RBP17.55■□□□□ 0.4
FAM49B-208ENST00000518344 QSOX2Q6ZRP7 698 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 RIPOR1Q6ZS17 1223 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 RPS27LQ71UM5 84 aaKnown RBP17.55■□□□□ 0.4
FAM49B-208ENST00000518344 CYP4X1Q8N118 509 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 TMEM151AQ8N4L1 468 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 ACMSDQ8TDX5 336 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 PSMF1Q92530 271 aa17.55■□□□□ 0.4
FAM49B-208ENST00000518344 REPS1Q96D71 796 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms