RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 UQCRC1P31930 480 aa18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 CTBP1Q13363 440 aa18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 XKR6Q5GH73 641 aa18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 TMEM198Q66K66 360 aa18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 ZNF470Q6ECI4 717 aa18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 KIAA0408Q6ZU52 694 aa18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 SLC13A5Q86YT5 568 aaPredicted RBP18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 SYCE1Q8N0S2 351 aa18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 CD200R1Q8TD46 325 aa18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 CNPPD1Q9BV87 410 aa18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 FRMD8P1Q9BZ68 369 aaPredicted RBP18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 CCDC68Q9H2F9 335 aa18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 PNO1Q9NRX1 252 aaKnown RBP18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 KLHL42Q9P2K6 505 aa18.89■□□□□ 0.61
SQSTM1-215ENST00000514093 A8MVJ9 347 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 BCKDKO14874 412 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 OR6B1O95007 311 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 PPP2R1BP30154 601 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 MAGEA5P43359 124 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 PWP1Q13610 501 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 LCTLQ6UWM7 567 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 KIAA1328Q86T90 577 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 UTP15Q8TED0 518 aaKnown RBP18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 KCNJ9Q92806 393 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 NCLNQ969V3 563 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 PYCR2Q96C36 320 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 PDLIM2Q96JY6 352 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 MDFIQ99750 246 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 SGPP1Q9BX95 441 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 SPNS1Q9H2V7 528 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 DMRT3Q9NQL9 472 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 HPF1Q9NWY4 346 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 ACAD8Q9UKU7 415 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 EDARQ9UNE0 448 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 VPS9D1Q9Y2B5 631 aa18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 YARS2Q9Y2Z4 477 aaKnown RBP18.88■□□□□ 0.61
SQSTM1-215ENST00000514093 CTAGE15A4D2H0 777 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 OR14I1A6ND48 311 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 A6NNC1 897 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 AP3B1O00203 1094 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 PSMD12O00232 456 aaPredicted RBP18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 OR2J2O76002 312 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 CELA3AP09093 270 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 ADSLP30566 484 aaPredicted RBP18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 CCR8P51685 355 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 SKP1P63208 163 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 ZNF750Q32MQ0 723 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 SLC25A35Q3KQZ1 300 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 CATSPEREQ5SY80 951 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 SEL1L2Q5TEA6 688 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 TRILQ7L0X0 811 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 ABHD13Q7L211 337 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 CTAGE6Q86UF2 777 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 SLC22A16Q86VW1 577 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 TMEM251Q8N6I4 163 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 ARMC2Q8NEN0 867 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 MBD6Q96DN6 1003 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 C18orf12Q96KH6 178 aa18.87■□□□□ 0.61
SQSTM1-215ENST00000514093 GLSO94925 669 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 RNH1P13489 461 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 PAMP19021 973 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 RGS1Q08116 209 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 C1orf185Q5T7R7 199 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 HECTD2Q5U5R9 776 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 CASC4Q6P4E1 433 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 PAMR1Q6UXH9 720 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 RGS9BPQ6ZS82 235 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 CAMKMTQ7Z624 323 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 ABHD11Q8NFV4 315 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 OR4K1Q8NGD4 311 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 NT5CQ8TCD5 201 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 EEF1AKMT1Q8WVE0 214 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 ASB15Q8WXK1 588 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 VMP1Q96GC9 406 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 CCDC77Q9BR77 488 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 KLHL31Q9H511 634 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 CBLCQ9ULV8 474 aa18.86■□□□□ 0.61
SQSTM1-215ENST00000514093 ATP6AP2A0A1C7CYW4 349 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 TRBC2A0A5B9 178 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 WWP2O00308 870 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 ATP6AP2O75787 350 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 ZFAND5O76080 213 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 IGHG3P01860 377 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 RAF1P04049 648 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 SOX3P41225 446 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 GPR143P51810 404 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 THOC5Q13769 683 aaKnown RBP18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 DHX34Q14147 1143 aaKnown RBP18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 DEFB113Q30KQ7 82 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 CLEC9AQ6UXN8 241 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 CA13Q8N1Q1 262 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 SNF8Q96H20 258 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 OR4K3Q96R72 315 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 SARGQ9BW04 601 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 TSGA10Q9BZW7 698 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 TRIM5Q9C035 493 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 LDAHQ9H6V9 325 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 PARVBQ9HBI1 364 aa18.85■□□□□ 0.61
SQSTM1-215ENST00000514093 A0A1B0GVC2 190 aa18.84■□□□□ 0.61
SQSTM1-215ENST00000514093 KIAA1324LA8MWY0 1029 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms