RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 GRAP2O75791 330 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 NXPH4O95158 308 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 SIX3O95343 332 aaPredicted RBP4.39□□□□□ -1.71
CHD1-209ENST00000512844 ATP6V1B1P15313 513 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 IFNAR1P17181 557 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 CAPN2P17655 700 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 FEN1P39748 380 aaKnown RBP4.39□□□□□ -1.71
CHD1-209ENST00000512844 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 FKBP3Q00688 224 aaKnown RBP4.39□□□□□ -1.71
CHD1-209ENST00000512844 MAPK11Q15759 364 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 UPP1Q16831 310 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 SPANXN4Q5MJ08 99 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 HECTD3Q5T447 861 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 ZNF841Q6ZN19 808 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 FAM47EQ6ZV65 393 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 ANKRD46Q86W74 232 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 ABHD12Q8N2K0 398 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 ELMOD1Q8N336 334 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 TOMM40LQ969M1 308 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 CCDC114Q96M63 670 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 RPP25Q9BUL9 199 aaKnown RBP4.39□□□□□ -1.71
CHD1-209ENST00000512844 PUS3Q9BZE2 481 aaKnown RBP4.39□□□□□ -1.71
CHD1-209ENST00000512844 LSG1Q9H089 658 aaKnown RBP4.39□□□□□ -1.71
CHD1-209ENST00000512844 MTIF3Q9H2K0 278 aaKnown RBP4.39□□□□□ -1.71
CHD1-209ENST00000512844 PNNQ9H307 717 aaKnown RBP4.39□□□□□ -1.71
CHD1-209ENST00000512844 UBE2TQ9NPD8 197 aaPredicted RBP4.39□□□□□ -1.71
CHD1-209ENST00000512844 SLC7A10Q9NS82 523 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 CTSZQ9UBR2 303 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 PCDHGA1Q9Y5H4 931 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 KLK4Q9Y5K2 254 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 AUP1Q9Y679 476 aa4.39□□□□□ -1.71
CHD1-209ENST00000512844 IGLV4-3A0A075B6K6 122 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 ILVBLA1L0T0 632 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 ACOD1A6NK06 481 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 G3V2L1 256 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 SCO2O43819 266 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 PCP11498 1178 aaKnown RBP4.38□□□□□ -1.71
CHD1-209ENST00000512844 RPL9P32969 192 aaKnown RBP4.38□□□□□ -1.71
CHD1-209ENST00000512844 RIDAP52758 137 aaKnown RBP4.38□□□□□ -1.71
CHD1-209ENST00000512844 RPP38P78345 283 aaKnown RBP4.38□□□□□ -1.71
CHD1-209ENST00000512844 FOLH1Q04609 750 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 RIGQ13278 110 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 FAM182AQ5T1J6 154 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 SLC27A4Q6P1M0 643 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 RFPL4BQ6ZWI9 263 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 SLC25A42Q86VD7 318 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 CDC20BQ86Y33 519 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 POM121L12Q8N7R1 296 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 ZNF713Q8N859 430 aaPredicted RBP4.38□□□□□ -1.71
CHD1-209ENST00000512844 PDLIM5Q96HC4 596 aaKnown RBP4.38□□□□□ -1.71
CHD1-209ENST00000512844 ANP32EQ9BTT0 268 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 XPO4Q9C0E2 1151 aaKnown RBP4.38□□□□□ -1.71
CHD1-209ENST00000512844 STRADBQ9C0K7 418 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 ZCCHC17Q9NP64 241 aaKnown RBP4.38□□□□□ -1.71
CHD1-209ENST00000512844 HEG1Q9ULI3 1381 aa4.38□□□□□ -1.71
CHD1-209ENST00000512844 TDRD15B5MCY1 1934 aaKnown RBP4.37□□□□□ -1.71
CHD1-209ENST00000512844 A0A0B4J203 849 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 RNF103O00237 685 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 SIGLEC5O15389 551 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 TNFSF12O43508 249 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 HTATSF1O43719 755 aaKnown RBP4.37□□□□□ -1.71
CHD1-209ENST00000512844 TLX2O43763 284 aaPredicted RBP4.37□□□□□ -1.71
CHD1-209ENST00000512844 RAD51DO75771 328 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 ZFYP08048 801 aaPredicted RBP4.37□□□□□ -1.71
CHD1-209ENST00000512844 ANKRD34CP0C6C1 535 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 STMN1P16949 149 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 CASTP20810 708 aaKnown RBP4.37□□□□□ -1.71
CHD1-209ENST00000512844 ABCE1P61221 599 aaKnown RBP4.37□□□□□ -1.71
CHD1-209ENST00000512844 SRPXP78539 464 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 RBP5P82980 135 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 ZNF146Q15072 292 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 TCTEX1D4Q5JR98 221 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 Q6ZVQ6 151 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 SLC47A2Q86VL8 602 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 IQCA1Q86XH1 822 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 AMER3Q8N944 861 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 KIAA0895Q8NCT3 520 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 C17orf47Q8NEP4 570 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 ADPGKQ9BRR6 497 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 RBM24Q9BX46 236 aaKnown RBP4.37□□□□□ -1.71
CHD1-209ENST00000512844 JPT2Q9H910 190 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 RPS10P5Q9NQ39 176 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 MRGBPQ9NV56 204 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 VPS18Q9P253 973 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 ARMCX3Q9UH62 379 aaPredicted RBP4.37□□□□□ -1.71
CHD1-209ENST00000512844 PCNX3Q9H6A9 2034 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 SYNRGQ9UMZ2 1314 aa4.37□□□□□ -1.71
CHD1-209ENST00000512844 ECE2O60344 883 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 SELENOFO60613 162 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 SNAP91O60641 907 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 LRCH4O75427 683 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 SLU7O95391 586 aaKnown RBP4.36□□□□□ -1.71
CHD1-209ENST00000512844 KRT3P12035 628 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 TIA1P31483 386 aaKnown RBP eCLIP4.36□□□□□ -1.71
CHD1-209ENST00000512844 FCGR2BP31994 310 aaPredicted RBP4.36□□□□□ -1.71
CHD1-209ENST00000512844 FCGR2CP31995 323 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 CLCN4P51793 760 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 BTG1P62324 171 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 CD300CQ08708 224 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 CNTN1Q12860 1018 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms