RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 OR1F2PQ96R84 312 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 MTERF1Q99551 399 aaKnown RBP13.17□□□□□ -0.3
DDX41-212ENST00000511040 MS4A8Q9BY19 250 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 ZNF700Q9H0M5 742 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 ZBTB20Q9HC78 741 aaPredicted RBP13.17□□□□□ -0.3
DDX41-212ENST00000511040 SEMA4BQ9NPR2 832 aaPredicted RBP13.17□□□□□ -0.3
DDX41-212ENST00000511040 LUZP4Q9P127 313 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 PCTPQ9UKL6 214 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 TLN1Q9Y490 2541 aaKnown RBP13.17□□□□□ -0.3
DDX41-212ENST00000511040 BSNQ9UPA5 3926 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 FASNP49327 2511 aaKnown RBP13.16□□□□□ -0.3
DDX41-212ENST00000511040 LOC102723996A0A087X1L8 192 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 TLDC2A0PJX2 215 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 PSMD12O00232 456 aaPredicted RBP13.16□□□□□ -0.3
DDX41-212ENST00000511040 RTCAO00442 366 aaKnown RBP13.16□□□□□ -0.3
DDX41-212ENST00000511040 B3GALT2O43825 422 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 RNH1P13489 461 aaKnown RBP13.16□□□□□ -0.3
DDX41-212ENST00000511040 CD97P48960 835 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 NEK2P51955 445 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 CCNG1P51959 295 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 CDH13P55290 713 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 BTG2P78543 158 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 KLRB1Q12918 225 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 NSDHLQ15738 373 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 ADPRMQ3LIE5 342 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 IRAK1BP1Q5VVH5 260 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 LIPJQ5W064 366 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 NIPAL1Q6NVV3 410 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 ABHD17CQ6PCB6 329 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 CPEB2Q7Z5Q1 589 aaKnown RBP13.16□□□□□ -0.3
DDX41-212ENST00000511040 UBE3DQ7Z6J8 389 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 ANKRD37Q7Z713 158 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 ACMSDQ8TDX5 336 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 SMAD5Q99717 465 aaKnown RBP13.16□□□□□ -0.3
DDX41-212ENST00000511040 SORBS1Q9BX66 1292 aaKnown RBP13.16□□□□□ -0.3
DDX41-212ENST00000511040 PARD6BQ9BYG5 372 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 LHPPQ9H008 270 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 OR51B5Q9H339 312 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 ZNF552Q9H707 407 aaPredicted RBP13.16□□□□□ -0.3
DDX41-212ENST00000511040 COPS7BQ9H9Q2 264 aaPredicted RBP13.16□□□□□ -0.3
DDX41-212ENST00000511040 ZBTB26Q9HCK0 441 aa13.16□□□□□ -0.3
DDX41-212ENST00000511040 DOCK10Q96BY6 2186 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 CFAP46Q8IYW2 2715 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 PPP6CO00743 305 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 DLX3O60479 287 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 ALPPP05187 535 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 RPS17P08708 135 aaKnown RBP13.15□□□□□ -0.3
DDX41-212ENST00000511040 TAC1P20366 129 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 MAOAP21397 527 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 IL10P22301 178 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 MTTPP55157 894 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 SOX8P57073 446 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 RPS13P62277 151 aaKnown RBP13.15□□□□□ -0.3
DDX41-212ENST00000511040 ACTN3Q08043 901 aaPredicted RBP13.15□□□□□ -0.3
DDX41-212ENST00000511040 TGM3Q08188 693 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 ZRSR2Q15696 482 aaKnown RBP13.15□□□□□ -0.3
DDX41-212ENST00000511040 SFT2D3Q587I9 215 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 SGO1Q5FBB7 561 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 WDR93Q6P2C0 686 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 ZNF793Q6ZN11 406 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 ATG14Q6ZNE5 492 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 TDRPQ86YL5 185 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 KBTBD2Q8IY47 623 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 RBMXL3Q8N7X1 1067 aaKnown RBP13.15□□□□□ -0.3
DDX41-212ENST00000511040 FAM47BQ8NA70 645 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 ZNF483Q8TF39 744 aaPredicted RBP13.15□□□□□ -0.3
DDX41-212ENST00000511040 MTFMTQ96DP5 389 aaKnown RBP13.15□□□□□ -0.3
DDX41-212ENST00000511040 MAGEB10Q96LZ2 347 aaPredicted RBP13.15□□□□□ -0.3
DDX41-212ENST00000511040 EPN3Q9H201 632 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
DDX41-212ENST00000511040 DMRT3Q9NQL9 472 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 PRDM7Q9NQW5 492 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 RIC8BQ9NVN3 520 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 EMCNQ9ULC0 261 aa13.15□□□□□ -0.3
DDX41-212ENST00000511040 A0A088AWK7 358 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 A0A1B0GTL3 188 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 A0A1W2PQ72 361 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 MAGEB17A8MXT2 336 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 PRMT3O60678 531 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 DPM1O60762 260 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 CLDN9O95484 217 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 GSTA1P08263 222 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 PRR35P0CG20 571 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 ITGAMP11215 1152 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 ZNF10P21506 573 aaPredicted RBP13.14□□□□□ -0.31
DDX41-212ENST00000511040 JAK1P23458 1154 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 SERPINB1P30740 379 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 HPDP32754 393 aaPredicted RBP13.14□□□□□ -0.31
DDX41-212ENST00000511040 HNRNPFP52597 415 aaKnown RBP13.14□□□□□ -0.31
DDX41-212ENST00000511040 OR4D2P58180 307 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 HERVK_113P63132 956 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 TRAF3Q13114 568 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 TMEM35AQ53FP2 167 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 UNC50Q53HI1 259 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 AGAP7PQ5VUJ5 663 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 KHDRBS2Q5VWX1 349 aaKnown RBP13.14□□□□□ -0.31
DDX41-212ENST00000511040 METTL2BQ6P1Q9 378 aaKnown RBP13.14□□□□□ -0.31
DDX41-212ENST00000511040 EMBQ6PCB8 327 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 LINC00696Q6ZRV3 163 aa13.14□□□□□ -0.31
DDX41-212ENST00000511040 SH2D5Q6ZV89 423 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms