RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 TLR1Q15399 786 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 ZC3H12BQ5HYM0 836 aaKnown RBP9.7□□□□□ -0.86
NEK1-205ENST00000510108 MRM1Q6IN84 353 aaKnown RBP9.7□□□□□ -0.86
NEK1-205ENST00000510108 FAM71E1Q6IPT2 247 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 IRGCQ6NXR0 463 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 KMT5CQ86Y97 462 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 PLXDC1Q8IUK5 500 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 ARHGEF39Q8N4T4 335 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 MEIOBQ8N635 442 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 ZNF655Q8N720 491 aaPredicted RBP9.7□□□□□ -0.86
NEK1-205ENST00000510108 CAMKVQ8NCB2 501 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 OR2I1PQ8NGU4 316 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 FBXO27Q8NI29 283 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 SLC13A3Q8WWT9 602 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 ROPN1LQ96C74 230 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 KLHL29Q96CT2 875 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 RCN3Q96D15 328 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 MTERF3Q96E29 417 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 TSSK3Q96PN8 268 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 KCNC2Q96PR1 638 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 F2RL3Q96RI0 385 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 MAP3K3Q99759 626 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 DPYSL5Q9BPU6 564 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 TBCDQ9BTW9 1192 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 MMADHCQ9H3L0 296 aaPredicted RBP9.7□□□□□ -0.86
NEK1-205ENST00000510108 SMOC1Q9H4F8 434 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 EFCAB1Q9HAE3 211 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 ATP13A2Q9NQ11 1180 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 PRDM7Q9NQW5 492 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 PDP2Q9P2J9 529 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 ATP6V1HQ9UI12 483 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 LEF1Q9UJU2 399 aaPredicted RBP9.7□□□□□ -0.86
NEK1-205ENST00000510108 MAN2B2Q9Y2E5 1009 aa9.7□□□□□ -0.86
NEK1-205ENST00000510108 EP300Q09472 2414 aaPredicted RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 RIF1Q5UIP0 2472 aaKnown RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 COL27A1Q8IZC6 1860 aaPredicted RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 A0A0J9YVX5 310 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 URADA6NGE7 173 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 CCDC154A6NI56 674 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 H0YGG7 62 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 FXYD1O00168 92 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 SAP18O00422 153 aaKnown RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 MRASO14807 208 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 ANGPT2O15123 496 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 SCAMP2O15127 329 aaKnown RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 P2RX6O15547 441 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 FLRT2O43155 660 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 SRPX2O60687 465 aaPredicted RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 SH3BGRLO75368 114 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 ZBTB11O95625 1053 aaPredicted RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 NPPAP01160 153 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 KRT16P08779 473 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 ANKRD34CP0C6C1 535 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 ALDH4A1P30038 563 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 RPL3P39023 403 aaKnown RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 GRK6P43250 576 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 PPM1FP49593 454 aaPredicted RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 NUDT2P50583 147 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 DUSP3P51452 185 aaPredicted RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 CORO7P57737 925 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 ARF3P61204 181 aaPredicted RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 SRSF11Q05519 484 aaKnown RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 FOXM1Q08050 763 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 TGM3Q08188 693 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 UGT8Q16880 541 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 TIGD2Q4W5G0 525 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 TOR1AIP1Q5JTV8 583 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 PERM1Q5SV97 790 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 OR4C11Q6IEV9 310 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 FRMPD2BQ6IN97 320 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 TCEAL6Q6IPX3 200 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 TMEM214Q6NUQ4 689 aaKnown RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 GUSBP11Q6P575 273 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 TRIM40Q6P9F5 258 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 C16orf89Q6UX73 402 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 ZNF793Q6ZN11 406 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 FAM92BQ6ZTR7 304 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 ASCL5Q7RTU5 278 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 PGAM4Q8N0Y7 254 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 EID2Q8N6I1 236 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 KRTCAP2Q8N6L1 136 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 PCYOX1LQ8NBM8 494 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 OR8J2Q8NGG1 315 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 CLHC1Q8NHS4 586 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 NETO1Q8TDF5 533 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 UTP15Q8TED0 518 aaKnown RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 C16orf78Q8WTQ4 265 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 TCEAL3Q969E4 200 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 RERGQ96A58 199 aaPredicted RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 AHCYL2Q96HN2 611 aaKnown RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 SLC45A3Q96JT2 553 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 SLC41A2Q96JW4 573 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 EGLN2Q96KS0 407 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 FCRL4Q96PJ5 515 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 TEFMQ96QE5 360 aaKnown RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 CADM1Q9BY67 442 aaKnown RBP9.69□□□□□ -0.86
NEK1-205ENST00000510108 ROGDIQ9GZN7 287 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 KLHL31Q9H511 634 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 FAM60AQ9NP50 221 aa9.69□□□□□ -0.86
NEK1-205ENST00000510108 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms