RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SNRPAP09012 282 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 CELA3AP09093 270 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 HIST1H2AGP0C0S8 130 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 ZGLP1P0C6A0 271 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 HIST1H2ADP20671 130 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 ALAS2P22557 587 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 CERS1P27544 350 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 HNF4AP41235 474 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 RAB8AP61006 207 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 RPS26P62854 115 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 RHAGQ02094 409 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 RHDQ02161 417 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 EEF1A2Q05639 463 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF844Q08AG5 666 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 CHIT1Q13231 466 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 ACAP2Q15057 778 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 PCOLCEQ15113 449 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 RASA2Q15283 850 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 PFKFB4Q16877 469 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 MUM1Q2TAK8 710 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 UNC50Q53HI1 259 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 TOR1AIP1Q5JTV8 583 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 GARNL3Q5VVW2 1013 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 LETMD1Q6P1Q0 360 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 BORAQ6PGQ7 559 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 CEP128Q6ZU80 1094 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 C4orf33Q8N1A6 199 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 CA13Q8N1Q1 262 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 TCAIMQ8N3R3 496 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 TEX9Q8N6V9 391 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 TMEM102Q8N9M5 508 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 SNX31Q8N9S9 440 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 STAG3L4Q8TBR4 150 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 WDR20Q8TBZ3 569 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF473Q8WTR7 871 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 SLC13A3Q8WWT9 602 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 N4BP2L2Q92802 583 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 DOCK10Q96BY6 2186 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 MS4A6EQ96DS6 147 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 HIST1H2AHQ96KK5 128 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 HIST1H2AJQ99878 128 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 DPH2Q9BQC3 489 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 H2AFJQ9BTM1 129 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 NUDT9Q9BW91 350 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 C1QTNF3Q9BXJ4 246 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 GPR87Q9BY21 358 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 VN1R1Q9GZP7 353 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 DRC3Q9H069 523 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 TSPYL1Q9H0U9 437 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 RHBGQ9H310 441 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 EHD1Q9H4M9 534 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 GSTO2Q9H4Y5 243 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 WDR54Q9H977 334 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF304Q9HCX3 659 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 MLXIPLQ9NP71 852 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 DMRT3Q9NQL9 472 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 TXLNGQ9NUQ3 528 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 GPRC5BQ9NZH0 403 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 IFT80Q9P2H3 777 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 LGALS13Q9UHV8 139 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 FBXL4Q9UKA2 621 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 TLK1Q9UKI8 766 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 TP53TG5Q9Y2B4 290 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 MAN2B2Q9Y2E5 1009 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 RNF11Q9Y3C5 154 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 NAALAD2Q9Y3Q0 740 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 CSAG2Q9Y5P2 127 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 FASNP49327 2511 aaKnown RBP6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 LOC102723996A0A087X1L8 192 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 IGKV3D-11A0A0A0MRZ8 115 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 A0A1W2PS29 197 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 C9J4A7 227 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 FAM227AF5H4B4 570 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 STX16-NPEPL1H3BU86 382 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 UBFD1O14562 309 aaKnown RBP6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 STX16O14662 325 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 SH3BGRLO75368 114 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 FBXO24O75426 580 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 CDC123O75794 336 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 KRT38O76015 456 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 SCELO95171 688 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 BMP10O95393 424 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 ALBP02768 609 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 PF4P02776 101 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 HBQ1P09105 142 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 ARAFP10398 606 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 ALOX12P18054 663 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 GNAZP19086 355 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 HRH2P25021 359 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 CNTFP26441 200 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 PPP2R1BP30154 601 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 AHRP35869 848 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 FOLR3P41439 243 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 CASP2P42575 452 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 ARSFP54793 590 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 ALDH18A1P54886 795 aaKnown RBP6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 CDH13P55290 713 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 FOXA1P55317 472 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 SLC18A2Q05940 514 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 ILF2Q12905 390 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms