RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CD300CQ08708 224 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 DLG1Q12959 904 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MAB21L1Q13394 359 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ALCAMQ13740 583 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF273Q14593 569 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 IRF3Q14653 427 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MESDQ14696 234 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 OXA1LQ15070 435 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 RPS6KA1Q15418 735 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TAZQ16635 292 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 GOLGA7BQ2TAP0 167 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 AP5B1Q2VPB7 878 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 DCST1Q5T197 706 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MANEALQ5VSG8 457 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 UBE2UQ5VVX9 321 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 OR6B2Q6IFH4 312 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ANKRD26P1Q6NSI1 321 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MRNIPQ6NTE8 343 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 UGT3A1Q6NUS8 523 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 METTL7BQ6UX53 244 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC39A5Q6ZMH5 540 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 RD3Q7Z3Z2 195 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF573Q86YE8 665 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 LACC1Q8IV20 430 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ZZZ3Q8IYH5 903 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 RNF113BQ8IZP6 322 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 GCNT2Q8N0V5 402 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 LGI4Q8N135 537 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 C4orf33Q8N1A6 199 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 GALNT4Q8N4A0 578 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CCDC185Q8N715 623 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM86B1Q8N7N1 296 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 Q8N9G6 341 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PDPRQ8NCN5 879 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC17A8Q8NDX2 589 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 OR52N2Q8NGI0 321 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 OR52E1Q8NGJ3 308 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 C9orf43Q8TAL5 461 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTL9Q8TC94 416 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTRT1Q8TDG2 376 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MRGPRDQ8TDS7 321 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 WFIKKN2Q8TEU8 576 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PPP4R1Q8TF05 950 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CASKIN2Q8WXE0 1202 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SSH1Q8WYL5 1049 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TRIB2Q92519 343 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ADIPOR1Q96A54 375 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MCUR1Q96AQ8 359 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 EAF2Q96CJ1 260 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC35A4Q96G79 324 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MARS2Q96GW9 593 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC41A2Q96JW4 573 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MRGPRX4Q96LA9 322 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PFDN5Q99471 154 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CDCA3Q99618 268 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF184Q99676 751 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 REEP2Q9BRK0 252 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MND1Q9BWT6 205 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MROQ9BYG7 248 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TRIM9Q9C026 710 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTR6Q9GZN1 396 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 NMUR2Q9GZQ4 415 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 LTB4R2Q9NPC1 389 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CCNB1IP1Q9NPC3 277 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PRMT8Q9NR22 394 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC6A13Q9NSD5 602 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MED17Q9NVC6 651 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 HIF1ANQ9NWT6 349 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 VAPAQ9P0L0 249 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 RSL24D1Q9UHA3 163 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TUBE1Q9UJT0 475 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 UTS2RQ9UKP6 389 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MGAT4BQ9UQ53 548 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MTO1Q9Y2Z2 717 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 GRIP1Q9Y3R0 1128 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PCDHB1Q9Y5F3 818 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 HS3ST4Q9Y661 456 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TEX264Q9Y6I9 313 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 AFF2P51816 1311 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 AOX1Q06278 1338 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM135BQ49AJ0 1406 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 FANCD2Q9BXW9 1451 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 STRCQ7RTU9 1775 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 A0A0G2JLW4 131 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 NPEPPSL1A6NEC2 478 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 LGALS8O00214 317 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 QSOX1O00391 747 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CCSO14618 274 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 STX16O14662 325 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ABCD4O14678 606 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 STX7O15400 261 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CHP2O43745 196 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TLX2O43763 284 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SCGB2A1O75556 95 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 POP7O75817 140 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 HAUS5O94927 633 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 NTSR2O95665 410 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TOP3BO95985 862 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 GSRP00390 522 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 FGBP02675 491 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms