RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TRIM8Q9BZR9 551 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 RHBGQ9H310 441 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 KIR3DX1Q9H7L2 352 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 CARS2Q9HA77 564 aaKnown RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 TPT1P8Q9HAU6 139 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 MBNL1Q9NR56 388 aaKnown RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 GIMAP4Q9NUV9 329 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 DCAF13Q9NV06 445 aaKnown RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 TMEM184CQ9NVA4 438 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 THUMPD1Q9NXG2 353 aaKnown RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 SLC25A37Q9NYZ2 338 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 KIF17Q9P2E2 1029 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 C3orf18Q9UK00 162 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 BLOC1S6Q9UL45 172 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 PLAGL1Q9UM63 463 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 SUFUQ9UMX1 484 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 OAZ3Q9UMX2 235 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 FAF1Q9UNN5 650 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 ZFR2Q9UPR6 939 aaKnown RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 KCNK6Q9Y257 313 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 PRKAB1Q9Y478 270 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 EYSQ5T1H1 3165 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 A0A087WXM4 84 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 A0A1W2PRB8 838 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 TCRBV21S2A2A0A5A6 115 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 DPPA5A6NC42 116 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 KRT87PA6NCN2 255 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 CCDC160A6NGH7 325 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 A6NHS1 94 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 EIF4E1BA6NMX2 242 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 C5orf58C9J3I9 102 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 G3V2T6 193 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 H0YAE9 185 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 SOCS2O14508 198 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 EI24O14681 340 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 TNFRSF10CO14798 259 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 SLC31A1O15431 190 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ZW10O43264 779 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 OR1F1O43749 312 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 TBX19O60806 448 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 PRAMEF4O60810 478 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 NOL3O60936 208 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 SH3BGRLO75368 114 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 GSNP06396 782 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ABCB1P08183 1280 aaPredicted RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 FURINP09958 794 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 THRBP10828 461 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ITGA2P17301 1181 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 UQCRC2P22695 453 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 MYF6P23409 242 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 RPL10P27635 214 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 MAT2AP31153 395 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 AHRP35869 848 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 CRATP43155 626 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 SSR2P43308 183 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 TSFMP43897 325 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 RPL5P46777 297 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 RABIFP47224 123 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 PRIM2P49643 509 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 NR1H2P55055 460 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 TAS2R50P59544 299 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 RAE1P78406 368 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 NHLH1Q02575 133 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 PRDX1Q06830 199 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 RGS1Q08116 209 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ILF3Q12906 894 aaKnown RBP eCLIP6.62□□□□□ -1.35
USP39-219ENST00000496047 SMAD4Q13485 552 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 PDE7AQ13946 482 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 GK3PQ14409 553 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 PLCL1Q15111 1095 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ZNF630Q2M218 657 aaPredicted RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 ZXDCQ2QGD7 858 aaPredicted RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 GTDC1Q4AE62 458 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 DEPDC1Q5TB30 811 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 PRAMEF9Q5VWM5 478 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 BHLHB9Q6PI77 547 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 UGT2A3Q6UWM9 527 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ENPP7Q6UWV6 458 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 WASH2PQ6VEQ5 465 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 EIF3MQ7L2H7 374 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 SLC9B2Q86UD5 537 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 STK32CQ86UX6 486 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 FAM129CQ86XR2 697 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ZDHHC21Q8IVQ6 265 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 CHERPQ8IWX8 916 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 RNF175Q8N4F7 328 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 AVL9Q8NBF6 648 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 SETD9Q8NE22 299 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ABHD11Q8NFV4 315 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 OR52N2Q8NGI0 321 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 GOT1L1Q8NHS2 421 aaPredicted RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 RPLP0P6Q8NHW5 317 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 PNPT1Q8TCS8 783 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 MAGEE2Q8TD90 523 aaPredicted RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 RASSF5Q8WWW0 418 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 FAM3CQ92520 227 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 TMBIM1Q969X1 311 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 MIEF2Q96C03 454 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ZBED6CLQ96FA7 236 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms