RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SUMF1Q8NBK3 374 aa21.8■■□□□ 1.08
USF3-203ENST00000491165 FAM162AQ96A26 154 aa21.8■■□□□ 1.08
USF3-203ENST00000491165 OSBPL10Q9BXB5 764 aa21.8■■□□□ 1.08
USF3-203ENST00000491165 SLC12A9Q9BXP2 914 aa21.8■■□□□ 1.08
USF3-203ENST00000491165 GSDMCQ9BYG8 508 aa21.8■■□□□ 1.08
USF3-203ENST00000491165 CD244Q9BZW8 370 aa21.8■■□□□ 1.08
USF3-203ENST00000491165 ACTR8Q9H981 624 aa21.8■■□□□ 1.08
USF3-203ENST00000491165 PCOLCE2Q9UKZ9 415 aa21.8■■□□□ 1.08
USF3-203ENST00000491165 ASF1AQ9Y294 204 aa21.8■■□□□ 1.08
USF3-203ENST00000491165 AP3M1Q9Y2T2 418 aa21.8■■□□□ 1.08
USF3-203ENST00000491165 SCELO95171 688 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 PIK3CGP48736 1102 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 TPD52P55327 224 aaPredicted RBP21.79■■□□□ 1.08
USF3-203ENST00000491165 HNRNPKP61978 463 aaKnown RBP eCLIP21.79■■□□□ 1.08
USF3-203ENST00000491165 HLA-BQ31612 363 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 NAGSQ8N159 534 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 SLC25A45Q8N413 288 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 LMNTD1Q8N9Z9 388 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 OR52E4Q8NGH9 312 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 MAGED4Q96JG8 741 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 IKZF5Q9H5V7 419 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 SMURF2Q9HAU4 748 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 IMP3Q9NV31 184 aaKnown RBP21.79■■□□□ 1.08
USF3-203ENST00000491165 FAM86C1Q9NVL1 165 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 USE1Q9NZ43 259 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 ZNF624Q9P2J8 865 aaPredicted RBP21.79■■□□□ 1.08
USF3-203ENST00000491165 CXCR6O00574 342 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 GNGT2O14610 69 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 YY2O15391 372 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 AQP9O43315 295 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 ULK1O75385 1050 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 WDR47O94967 919 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 PGRP06401 933 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 F3P13726 295 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 GSTM2P28161 218 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 IST1P53990 364 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 PPP2R2BQ00005 443 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 IMPG1Q17R60 797 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 SPANXN4Q5MJ08 99 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 ZNF554Q86TJ5 538 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 RAB2BQ8WUD1 216 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 MBOAT4Q96T53 435 aa21.79■■□□□ 1.08
USF3-203ENST00000491165 RBM4BQ9BQ04 359 aaKnown RBP21.79■■□□□ 1.08
USF3-203ENST00000491165 RBM4Q9BWF3 364 aaKnown RBP21.79■■□□□ 1.08
USF3-203ENST00000491165 FARSBQ9NSD9 589 aaKnown RBP21.79■■□□□ 1.08
USF3-203ENST00000491165 GOLGA4Q13439 2230 aaKnown RBP21.78■■□□□ 1.08
USF3-203ENST00000491165 DMXL1Q9Y485 3027 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 C8GP07360 202 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 INHBBP09529 407 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 IL7RP16871 459 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 GDF5P43026 501 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 RPIAP49247 311 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 HMGCS1Q01581 520 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 RPE65Q16518 533 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 MOGQ16653 247 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 ANKDD1AQ495B1 522 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 DNAJC14Q6Y2X3 702 aaPredicted RBP21.78■■□□□ 1.08
USF3-203ENST00000491165 TRIM46Q7Z4K8 759 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 MSRB3Q8IXL7 192 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 CLMPQ9H6B4 373 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 PARVBQ9HBI1 364 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 LRTM1Q9HBL6 345 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 ASIC5Q9NY37 505 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 SLC25A37Q9NYZ2 338 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 TRPS1Q9UHF7 1281 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 ZNF490Q9ULM2 529 aaPredicted RBP21.78■■□□□ 1.08
USF3-203ENST00000491165 PCDHGA8Q9Y5G5 932 aa21.78■■□□□ 1.08
USF3-203ENST00000491165 GIMD1P0DJR0 217 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 ZNF182P17025 639 aaPredicted RBP21.77■■□□□ 1.08
USF3-203ENST00000491165 MAPK10P53779 464 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 ELOCQ15369 112 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 DEFB133Q30KQ1 61 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 RUNDC3AQ59EK9 446 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 WASH2PQ6VEQ5 465 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 ZC3H7AQ8IWR0 971 aaKnown RBP21.77■■□□□ 1.08
USF3-203ENST00000491165 FAM46DQ8NEK8 389 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 UBTD2Q8WUN7 234 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 RHBDF1Q96CC6 855 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 LOXL4Q96JB6 756 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 TBCDQ9BTW9 1192 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 LHPPQ9H008 270 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 WASH6PQ9NQA3 447 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 BLOC1S6Q9UL45 172 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 PLAGL1Q9UM63 463 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 OTOGLQ3ZCN5 2332 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 K7EPI3 171 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 NOBOXO60393 691 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 SEC22BO75396 215 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 PRKD3O94806 890 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 HNRNPCP07910 306 aaKnown RBP eCLIP21.77■■□□□ 1.08
USF3-203ENST00000491165 GABARAPL2P60520 117 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 LAPTM5Q13571 262 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 PLA2G2CQ5R387 149 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 MICU2Q8IYU8 434 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 SPARTQ8N0X7 666 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 CHDHQ8NE62 594 aaPredicted RBP21.77■■□□□ 1.08
USF3-203ENST00000491165 OR5K2Q8NHB8 316 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 CEP76Q8TAP6 659 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 GIPC3Q8TF64 312 aa21.77■■□□□ 1.08
USF3-203ENST00000491165 TANKQ92844 425 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms