RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 DSCR3O14972 297 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 PCDH7O60245 1069 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 GALR3O60755 368 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-230ENST00000491028 NSA2O95478 260 aaKnown RBP17.68■□□□□ 0.42
MCF2L-230ENST00000491028 IL1RNP18510 177 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 HIST1H1TP22492 207 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-230ENST00000491028 ETV5P41161 510 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 GSTM5P46439 218 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 MAPK10P53779 464 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 IRX1P78414 480 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-230ENST00000491028 FOXK2Q01167 660 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 RFTN2Q52LD8 501 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-230ENST00000491028 C3orf38Q5JPI3 329 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 PWWP2BQ6NUJ5 590 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 NOXRED1Q6NXP6 359 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 ZNF793Q6ZN11 406 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 ZCCHC7Q8N3Z6 543 aaKnown RBP17.68■□□□□ 0.42
MCF2L-230ENST00000491028 SERINC2Q96SA4 455 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 ASPSCR1Q9BZE9 553 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 B3GNT4Q9C0J1 378 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 RABEP2Q9H5N1 569 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 CLK4Q9HAZ1 481 aaKnown RBP17.68■□□□□ 0.42
MCF2L-230ENST00000491028 NOP53Q9NZM5 478 aaKnown RBP17.68■□□□□ 0.42
MCF2L-230ENST00000491028 CDC14AQ9UNH5 594 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 TRIM33Q9UPN9 1127 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 SATB2Q9UPW6 733 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 EIF3LQ9Y262 564 aaKnown RBP17.68■□□□□ 0.42
MCF2L-230ENST00000491028 KIF26BQ2KJY2 2108 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 A0A1W2PNU3 283 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-230ENST00000491028 ARHGAP10A1A4S6 786 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 H0YIG0 161 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 FOXS1O43638 330 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 CPNE3O75131 537 aaKnown RBP17.67■□□□□ 0.42
MCF2L-230ENST00000491028 KLHL18O94889 574 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 TIAF1O95411 115 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 PRPS2P11908 318 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 ATP5A1P25705 553 aaKnown RBP17.67■□□□□ 0.42
MCF2L-230ENST00000491028 AVPR1BP47901 424 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 RAE1P78406 368 aaKnown RBP17.67■□□□□ 0.42
MCF2L-230ENST00000491028 BTN3A2P78410 334 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 DEFB134Q4QY38 66 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 TMEM164Q5U3C3 297 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 GKAP1Q5VSY0 366 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-230ENST00000491028 METTL21CQ5VZV1 264 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 PRMT9Q6P2P2 845 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 TTLL10Q6ZVT0 673 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 PROKR1Q8TCW9 393 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 CTRCQ99895 268 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 NPLQ9BXD5 320 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-230ENST00000491028 NAALAD2Q9Y3Q0 740 aa17.67■□□□□ 0.42
MCF2L-230ENST00000491028 POLR3HQ9Y535 204 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-230ENST00000491028 A0A0A6YYD5 115 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 A0A0G2JN53 185 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 FAM149AA5PLN7 773 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 NDUFAB1O14561 156 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 B3GALT2O43825 422 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 EEDO75530 441 aaKnown RBP17.66■□□□□ 0.42
MCF2L-230ENST00000491028 MED26O95402 600 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 KLK1P06870 262 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 CERS1P27544 350 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 TPP2P29144 1249 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-230ENST00000491028 TRA2BP62995 288 aaKnown RBP17.66■□□□□ 0.42
MCF2L-230ENST00000491028 SNRPNP63162 240 aaKnown RBP17.66■□□□□ 0.42
MCF2L-230ENST00000491028 SF3A3Q12874 501 aaKnown RBP eCLIP17.66■□□□□ 0.429e-9■■■■□ 25.4
MCF2L-230ENST00000491028 PRSS41Q7RTY9 318 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 PDSS2Q86YH6 399 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 FAM9CQ8IZT9 166 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 ACOT4Q8N9L9 421 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 BCAS4Q8TDM0 211 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 LRFN5Q96NI6 719 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 SORBS1Q9BX66 1292 aaKnown RBP17.66■□□□□ 0.42
MCF2L-230ENST00000491028 POLR1BQ9H9Y6 1135 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 AIG1Q9NVV5 245 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 LYARQ9NX58 379 aaKnown RBP17.66■□□□□ 0.42
MCF2L-230ENST00000491028 DHCR7Q9UBM7 475 aaKnown RBP17.66■□□□□ 0.42
MCF2L-230ENST00000491028 ARL2BPQ9Y2Y0 163 aa17.66■□□□□ 0.42
MCF2L-230ENST00000491028 A0A0A6YYC8 382 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-230ENST00000491028 GNG14A0A1W2PPG7 69 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 E9PBE3 544 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 I3L1I5 382 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-230ENST00000491028 UBDO15205 165 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 KLHL41O60662 606 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 ANXA4P09525 319 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-230ENST00000491028 ALDOCP09972 364 aaKnown RBP17.65■□□□□ 0.42
MCF2L-230ENST00000491028 IDO1P14902 403 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 MAPK12P53778 367 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 CBX1P83916 185 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 ZNF763Q0D2J5 394 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 SLC9A5Q14940 896 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 GSTA3Q16772 222 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 CCNYL2Q5T2Q4 361 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 PRAMEF17Q5VTA0 474 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 IL23RQ5VWK5 629 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 MRM1Q6IN84 353 aaKnown RBP17.65■□□□□ 0.42
MCF2L-230ENST00000491028 FOXR1Q6PIV2 292 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 IGF2-ASQ6U949 168 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 CYP20A1Q6UW02 462 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 OR9A4Q8NGU2 314 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 CLIP3Q96DZ5 547 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 MMABQ96EY8 250 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms