RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ACY1Q03154 408 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 HSF2Q03933 536 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ILF3Q12906 894 aaKnown RBP eCLIP2.74□□□□□ -1.973e-8■■■■□ 26.4
UBXN4-208ENST00000490163 GPNMBQ14956 572 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 FNDC7Q5VTL7 733 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ENPP7Q6UWV6 458 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CCDC80Q76M96 950 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 PRUNE1Q86TP1 453 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 AQP12AQ8IXF9 295 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 GCNT2Q8N0V5 402 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF548Q8NEK5 533 aaPredicted RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 GJC3Q8NFK1 279 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 FAM89AQ96GI7 184 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ABHD8Q96I13 439 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 C8orf76Q96K31 380 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ALS2CR12Q96Q35 445 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 TSC22D3Q99576 134 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 RPF1Q9H9Y2 349 aaKnown RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ZMAT5Q9UDW3 170 aaKnown RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 SLC8A2Q9UPR5 921 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ERVK-11Q9UQG0 969 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 HBS1LQ9Y450 684 aaKnown RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 MYH3P11055 1940 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 PSME4Q14997 1843 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 TRAV26-1A0A087WT03 109 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 A0A0U1RRA0 63 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 TMEM89A2RUT3 159 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 TMEM191CA6NGB0 347 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 TMEM191BP0C7N4 346 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 IL7RP16871 459 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 AXLP30530 894 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 ATP5OP48047 213 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 B3GALT5-AS1P59052 145 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 HYAL1Q12794 435 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 SLC36A3Q495N2 470 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 WLSQ5T9L3 541 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 TCERG1LQ5VWI1 586 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 SIGIRRQ6IA17 410 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 TRMT1LQ7Z2T5 733 aaKnown RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 CPEB2Q7Z5Q1 589 aaKnown RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 C17orf64Q86WR6 236 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 PLA2G4DQ86XP0 818 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 IL17DQ8TAD2 202 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 TMEM125Q96AQ2 219 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF558Q96NG5 402 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 KCNA7Q96RP8 456 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 LRRCC1Q9C099 1032 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 C5orf66Q9H5L9 145 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 GPN1Q9HCN4 374 aaPredicted RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 MRPS30Q9NP92 439 aaKnown RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 FAM207AQ9NSI2 230 aaPredicted RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 ZNHIT6Q9NWK9 470 aaKnown RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 ARMCX3Q9UH62 379 aaPredicted RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 RASD1Q9Y272 281 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 CRB1P82279 1406 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 FLT4P35916 1363 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 FBLL1A6NHQ2 334 aaKnown RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 ASB14A6NK59 587 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 MS4A18H0YCH9 400 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 HS3ST1O14792 307 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 ADAM12O43184 909 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 LAMTOR5O43504 91 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 TSPAN1O60635 241 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 RAMP1O60894 148 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 E2F6O75461 281 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF189O75820 626 aaPredicted RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 AKR7A3O95154 331 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 FESP07332 822 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 YES1P07947 543 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 TACSTD2P09758 323 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 OTX1P32242 354 aaPredicted RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 CDKN1BP46527 198 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 HSPA2P54652 639 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 SLC34A1Q06495 639 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 IFFO1Q0D2I5 559 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF169Q14929 603 aaPredicted RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 KRT31Q15323 416 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 CCDC57Q2TAC2 916 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 CCDC152Q4G0S7 254 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 MIDNQ504T8 468 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 RHBDD2Q6NTF9 364 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 MFSD12Q6NUT3 480 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 C16orf87Q6PH81 154 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 KIRREL3Q8IZU9 778 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 PCDH20Q8N6Y1 951 aaKnown RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 GBP7Q8N8V2 638 aaPredicted RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 OR8K1Q8NGG5 319 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 FAM76AQ8TAV0 307 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 HM13Q8TCT9 377 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 DTX3LQ8TDB6 740 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 URB1-AS1Q96HZ7 61 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 PLEKHF1Q96S99 279 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 SPRTNQ9H040 489 aaPredicted RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 CYSLTR2Q9NS75 346 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 THEGQ9P2T0 379 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 C11orf21Q9P2W6 132 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 NOCTQ9UK39 431 aaKnown RBP2.73□□□□□ -1.97
UBXN4-208ENST00000490163 SLCO1B1Q9Y6L6 691 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 PXDNLA1KZ92 1463 aa2.73□□□□□ -1.97
UBXN4-208ENST00000490163 GRIN2DO15399 1336 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms