RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ACTL8Q9H568 366 aa16.51■□□□□ 0.23
ERCC3-207ENST00000490062 EML4Q9HC35 981 aaKnown RBP16.51■□□□□ 0.23
ERCC3-207ENST00000490062 NKIRAS1Q9NYS0 192 aa16.51■□□□□ 0.23
ERCC3-207ENST00000490062 CTSFQ9UBX1 484 aa16.51■□□□□ 0.23
ERCC3-207ENST00000490062 HAO1Q9UJM8 370 aa16.51■□□□□ 0.23
ERCC3-207ENST00000490062 MAU2Q9Y6X3 613 aa16.51■□□□□ 0.23
ERCC3-207ENST00000490062 SCN3AQ9NY46 2000 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 TMEM114B3SHH9 223 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 SGK494L7N484 410 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 FFAR3O14843 346 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 GPR42O15529 346 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 ULK1O75385 1050 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 UROSP10746 265 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 NEK2P51955 445 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 MTTPP55157 894 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 RAB8AP61006 207 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 OCA2Q04671 838 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 VAC14Q08AM6 782 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 ST3GAL2Q16842 350 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 ARL13AQ5H913 290 aaPredicted RBP16.5■□□□□ 0.23
ERCC3-207ENST00000490062 MLIPQ5VWP3 458 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 TTC19Q6DKK2 380 aaPredicted RBP16.5■□□□□ 0.23
ERCC3-207ENST00000490062 CCDC81Q6ZN84 652 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 CUZD1Q86UP6 607 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 ZC3H7AQ8IWR0 971 aaKnown RBP16.5■□□□□ 0.23
ERCC3-207ENST00000490062 KIRREL3Q8IZU9 778 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 ZCCHC7Q8N3Z6 543 aaKnown RBP16.5■□□□□ 0.23
ERCC3-207ENST00000490062 METTL27Q8N6F8 245 aaPredicted RBP16.5■□□□□ 0.23
ERCC3-207ENST00000490062 ADAMTS18Q8TE60 1221 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 SELENOMQ8WWX9 145 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 RGMAQ96B86 450 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 ZBTB9Q96C00 473 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 FAR2Q96K12 515 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 OR51B5Q9H339 312 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 DDX31Q9H8H2 851 aaKnown RBP16.5■□□□□ 0.23
ERCC3-207ENST00000490062 TNFRSF12AQ9NP84 129 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 TRPC4Q9UBN4 977 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 ADAM29Q9UKF5 820 aa16.5■□□□□ 0.23
ERCC3-207ENST00000490062 A0A1W2PQ72 361 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 PLPP1O14494 284 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 RDH16O75452 317 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 BMP10O95393 424 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 ETHE1O95571 254 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 PDYNP01213 254 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 ZGLP1P0C6A0 271 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 HIST1H1TP22492 207 aaPredicted RBP16.49■□□□□ 0.23
ERCC3-207ENST00000490062 ATP5A1P25705 553 aaKnown RBP16.49■□□□□ 0.23
ERCC3-207ENST00000490062 HMOX2P30519 316 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 ARRB2P32121 409 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 CCR10P46092 362 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 FOXA1P55317 472 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 DDX39BQ13838 428 aaKnown RBP16.49■□□□□ 0.23
ERCC3-207ENST00000490062 SSPNQ14714 243 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 UGT8Q16880 541 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 HHATQ5VTY9 493 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 ZCCHC23Q6ZST2 131 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 TRIM46Q7Z4K8 759 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 RNF175Q8N4F7 328 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 ZSCAN1Q8NBB4 408 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 OR51Q1Q8NH59 317 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 METTL2AQ96IZ6 378 aaKnown RBP16.49■□□□□ 0.23
ERCC3-207ENST00000490062 LYRM4Q9HD34 91 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 FARSBQ9NSD9 589 aaKnown RBP16.49■□□□□ 0.23
ERCC3-207ENST00000490062 NMRK1Q9NWW6 199 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 SIRT5Q9NXA8 310 aa16.49■□□□□ 0.23
ERCC3-207ENST00000490062 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.49■□□□□ 0.23
ERCC3-207ENST00000490062 PKD1L2Q7Z442 2459 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 CCDC88CQ9P219 2028 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 AZIN1O14977 448 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 CHST10O43529 356 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 B3GALT2O43825 422 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 IGHEP01854 428 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 CHRNGP07510 517 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 UMODP07911 640 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 BSGP35613 385 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 FOLR3P41439 243 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 PLA2G16P53816 162 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 BTN3A2P78410 334 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 CHI3L2Q15782 390 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 TUBB8Q3ZCM7 444 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 CES4AQ5XG92 561 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 KANK2Q63ZY3 851 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 OR4C11Q6IEV9 310 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 MRM1Q6IN84 353 aaKnown RBP16.48■□□□□ 0.23
ERCC3-207ENST00000490062 ZNF793Q6ZN11 406 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 ATG14Q6ZNE5 492 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 CLYBLQ8N0X4 340 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 CA13Q8N1Q1 262 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 METTL4Q8N3J2 472 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 ANKRD42Q8N9B4 389 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 ACOT4Q8N9L9 421 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 MIEF2Q96C03 454 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 C11orf24Q96F05 449 aaPredicted RBP16.48■□□□□ 0.23
ERCC3-207ENST00000490062 IP6K3Q96PC2 410 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 KCNA7Q96RP8 456 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 PRORYQ9H606 182 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 SEMA3GQ9NS98 782 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 AHSPQ9NZD4 102 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 DAPP1Q9UN19 280 aa16.48■□□□□ 0.23
ERCC3-207ENST00000490062 PTRH2Q9Y3E5 179 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms