RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 GTF2H2CQ6P1K8 395 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 Q6ZS92 163 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 GOLGA7Q7Z5G4 137 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 PTGR2Q8N8N7 351 aaPredicted RBP15□□□□□ -0.01
CTDSP1-209ENST00000488627 BRIX1Q8TDN6 353 aaKnown RBP15□□□□□ -0.01
CTDSP1-209ENST00000488627 UBE2E3Q969T4 207 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 MIB2Q96AX9 1013 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 MTBPQ96DY7 904 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 PHF21BQ96EK2 531 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 LMF1Q96S06 567 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 NPLQ9BXD5 320 aaPredicted RBP15□□□□□ -0.01
CTDSP1-209ENST00000488627 LUZP4Q9P127 313 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 PLAAQ9Y263 795 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 B3GNT3Q9Y2A9 372 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 TSC22D4Q9Y3Q8 395 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 CLDN16Q9Y5I7 305 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 SCN3AQ9NY46 2000 aa15□□□□□ -0.01
CTDSP1-209ENST00000488627 TNRC6AQ8NDV7 1962 aaKnown RBP15□□□□□ -0.01
CTDSP1-209ENST00000488627 NBASA2RRP1 2371 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 IGKV3D-11A0A0A0MRZ8 115 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 TTLL8A6PVC2 850 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 STX16-NPEPL1H3BU86 382 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 STX16O14662 325 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 SEC24DO94855 1032 aaPredicted RBP14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 SHBGP04278 402 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 ITGAMP11215 1152 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 ICAM2P13598 275 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 JAK1P23458 1154 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 EEF1DP29692 281 aaKnown RBP14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 SFT2D3Q587I9 215 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 CRB2Q5IJ48 1285 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 PLAG1Q6DJT9 500 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 ISLR2Q6UXK2 745 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 ZNF793Q6ZN11 406 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 QSOX2Q6ZRP7 698 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 ZADH2Q8N4Q0 377 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 L3MBTL4Q8NA19 623 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 FAR2Q96K12 515 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 SCYL1Q96KG9 808 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 MRPL46Q9H2W6 279 aaKnown RBP14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 IPPKQ9H8X2 491 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 ZBTB26Q9HCK0 441 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 KCMF1Q9P0J7 381 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 TMEM216Q9P0N5 145 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 C19orf25Q9UFG5 118 aaPredicted RBP14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 TMCO1Q9UM00 188 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 ANGPTL3Q9Y5C1 460 aa14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 GCN1Q92616 2671 aaKnown RBP14.99□□□□□ -0.01
CTDSP1-209ENST00000488627 H0YIV9 168 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 CYR61O00622 381 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 OR7A17O14581 309 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 PRMT3O60678 531 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 UGDHO60701 494 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 TGFB1P01137 390 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 HPDP32754 393 aaPredicted RBP14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 MTTPP55157 894 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 MFAP5Q13361 173 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 IRAK1BP1Q5VVH5 260 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 B3GNTL1Q67FW5 361 aaPredicted RBP14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 TRIM40Q6P9F5 258 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 SH2D5Q6ZV89 423 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 CUZD1Q86UP6 607 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 RNF175Q8N4F7 328 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 TMEM52Q8NDY8 209 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 HUS1BQ8NHY5 278 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 PPP4R1Q8TF05 950 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.98□□□□□ -0.016e-9■■■■■ 501.9
CTDSP1-209ENST00000488627 TM9SF4Q92544 642 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 PTCHD1Q96NR3 888 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 NSUN5Q96P11 429 aaKnown RBP14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 SERINC2Q96SA4 455 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 NOL11Q9H8H0 719 aaKnown RBP14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 ACTR8Q9H981 624 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 NECTIN3Q9NQS3 549 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 PTGFRNQ9P2B2 879 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 PSMC3IPQ9P2W1 217 aaPredicted RBP14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 ADGRE2Q9UHX3 823 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 PCTPQ9UKL6 214 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 RNF11Q9Y3C5 154 aa14.98□□□□□ -0.01
CTDSP1-209ENST00000488627 IQANK1A0A1B0GTG1 560 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 TCRBV16S1A1N1A0A5B0 115 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 PSMD12O00232 456 aaPredicted RBP14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 B3GALT2O43825 422 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 SMIM24O75264 130 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 PCNAP12004 261 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 MAOAP21397 527 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 CERS1P27544 350 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 SERPINB1P30740 379 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 PIK3CBP42338 1070 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 PIK3CGP48736 1102 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 HNRNPFP52597 415 aaKnown RBP14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 LIM2P55344 173 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 RAB38P57729 211 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 OR4D2P58180 307 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 KCNC4Q03721 635 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 INPP5JQ15735 1006 aaPredicted RBP14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 TMEM35AQ53FP2 167 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 PRR30Q53SZ7 412 aaPredicted RBP14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 DEPDC1Q5TB30 811 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 H3F3CQ6NXT2 135 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms