RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 MAN2C1Q9NTJ4 1040 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 WDR83OSQ9Y284 106 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 R4GN57 208 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 ASPMQ8IZT6 3477 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 SPTA1P02549 2419 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 CEP295Q9C0D2 2601 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 HECTD1Q9ULT8 2610 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 EDC4Q6P2E9 1401 aaKnown RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 NUP98P52948 1817 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 PHIPQ8WWQ0 1821 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 A0A1W2PPM1 405 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 TSPY2A6NKD2 308 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 A8MXE2 369 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF195O14628 629 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 HSP90AB1P08238 724 aaKnown RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 RPL35AP18077 110 aaKnown RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 UGT1A4P22310 534 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 HNRNPKP61978 463 aaKnown RBP eCLIP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 ACSM1Q08AH1 577 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 FASTKD3Q14CZ7 662 aaKnown RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 RBBP7Q16576 425 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 CTR9Q6PD62 1173 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 ERN2Q76MJ5 926 aaKnown RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 PLPPR4Q7Z2D5 763 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 ZER1Q7Z7L7 766 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 MYPOPQ86VE0 399 aaPredicted RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF843Q8N446 348 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 PI4KAP1Q8N8J0 262 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 CAMKVQ8NCB2 501 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 NUP37Q8NFH4 326 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 OR6J1Q8NGC5 347 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 OR4D10Q8NGI6 311 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 OLIG1Q8TAK6 271 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 GRK7Q8WTQ7 553 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 AZIN2Q96A70 460 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 OTUB1Q96FW1 271 aaPredicted RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 TDRD1Q9BXT4 1180 aaKnown RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 MTHFD2LQ9H903 347 aaPredicted RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 RNF121Q9H920 327 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 ELF5Q9UKW6 265 aaPredicted RBP3.73□□□□□ -1.81
ITGB1-214ENST00000488427 MOB4Q9Y3A3 225 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 CCL27Q9Y4X3 112 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 MYO9AB2RTY4 2548 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 FRYQ5TBA9 3013 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 C2CD3Q4AC94 2353 aa3.73□□□□□ -1.81
ITGB1-214ENST00000488427 EVC2Q86UK5 1308 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 CCL15-CCL14A0A0B4J2E2 113 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 IGKV3D-20A0A0C4DH25 116 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 CCDC188H7C350 402 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 UBE2CO00762 179 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 AP5Z1O43299 807 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 ZFAND5O76080 213 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 ACSL3O95573 720 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 PRKACGP22612 351 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 ACAT1P24752 427 aaKnown RBP3.72□□□□□ -1.81
ITGB1-214ENST00000488427 ELAVL4P26378 380 aaKnown RBP3.72□□□□□ -1.81
ITGB1-214ENST00000488427 LEPRP48357 1165 aaKnown RBP3.72□□□□□ -1.81
ITGB1-214ENST00000488427 TMEM50BP56557 158 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 GSCP56915 257 aaPredicted RBP3.72□□□□□ -1.81
ITGB1-214ENST00000488427 SLC8A3P57103 927 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 POLR2LP62875 67 aaKnown RBP3.72□□□□□ -1.81
ITGB1-214ENST00000488427 CACNG1Q06432 222 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 CCL15Q16663 113 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 FAM174BQ3ZCQ3 159 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 SLC25A53Q5H9E4 307 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 PTAR1Q7Z6K3 402 aaPredicted RBP3.72□□□□□ -1.81
ITGB1-214ENST00000488427 GTSCR1Q86UQ5 136 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 OR8H2Q8N162 312 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 DCLK2Q8N568 766 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 IQUBQ8NA54 791 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 CCDC191Q8NCU4 936 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 OR10Q1Q8NGQ4 319 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 APOBEC4Q8WW27 367 aaKnown RBP3.72□□□□□ -1.81
ITGB1-214ENST00000488427 SEPT1Q8WYJ6 367 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 MRPS27Q92552 414 aaKnown RBP3.72□□□□□ -1.81
ITGB1-214ENST00000488427 EXT2Q93063 718 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF558Q96NG5 402 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 BTBD9Q96Q07 612 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 HNRNPABQ99729 332 aaKnown RBP3.72□□□□□ -1.81
ITGB1-214ENST00000488427 GTPBP2Q9BX10 602 aaKnown RBP3.72□□□□□ -1.81
ITGB1-214ENST00000488427 THAP2Q9H0W7 228 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 ACTL8Q9H568 366 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 PANK3Q9H999 370 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 RNF150Q9ULK6 438 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 SNX7Q9UNH6 387 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 MMP24Q9Y5R2 645 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 LRRC37AA6NMS7 1700 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 PIEZO2Q9H5I5 2752 aa3.72□□□□□ -1.81
ITGB1-214ENST00000488427 ANKRD36CQ5JPF3 1778 aa3.71□□□□□ -1.81
ITGB1-214ENST00000488427 RALGAPA2Q2PPJ7 1873 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 CFAP46Q8IYW2 2715 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 CASTOR2A6NHX0 329 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 C2CD4DB7Z1M9 353 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 RECQL5O94762 991 aaPredicted RBP3.71□□□□□ -1.82
ITGB1-214ENST00000488427 TBX6O95947 436 aaPredicted RBP3.71□□□□□ -1.82
ITGB1-214ENST00000488427 IGHEP01854 428 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 C9P02748 559 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms