RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 MED27Q6P2C8 311 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 SUSD1Q6UWL2 747 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 SCD5Q86SK9 330 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 LAX1Q8IWV1 398 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 ATP6V1C2Q8NEY4 427 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 SMG7Q92540 1137 aaKnown RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 FCRL4Q96PJ5 515 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 NEDD4LQ96PU5 975 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 PIP5K1AQ99755 562 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 CDADC1Q9BWV3 514 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 MCUBQ9NWR8 336 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 ACTL7AQ9Y615 435 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 COL24A1Q17RW2 1714 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 AOC2O75106 756 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 LAMP1P11279 417 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 EPHA2P29317 976 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 SUOXP51687 545 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 ZNF140P52738 457 aaPredicted RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 SMAD3P84022 425 aaKnown RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 GPR19Q15760 415 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 MICAQ29983 383 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 ZNF630Q2M218 657 aaPredicted RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 ATP13A5Q4VNC0 1218 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 PAMR1Q6UXH9 720 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 RAB42Q8N4Z0 105 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 OR8J1Q8NGP2 316 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 RFKQ969G6 155 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 UBE2E3Q969T4 207 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 OR5M11Q96RB7 305 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 NELL2Q99435 816 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 ACPTQ9BZG2 426 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 PCDHB7Q9Y5E2 793 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 A0A0U1RQS6 177 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 OR6C75A6NL08 312 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 WASH4PA8MWX3 477 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 STMND1H3BQB6 276 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 UPK1AO00322 258 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 SAP18O00422 153 aaKnown RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 OR7A17O14581 309 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 LYRM1O43325 122 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 CLDN7O95471 211 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 PRG2P13727 222 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 NOS3P29474 1203 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 ACSL1P33121 698 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 NRIP1P48552 1158 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 HK3P52790 923 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 TAS2R41P59536 307 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 DSTNP60981 165 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 POLR2LP62875 67 aaKnown RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 YBX1P67809 324 aaKnown RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 KCNC4Q03721 635 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 FAPQ12884 760 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 PLD1Q13393 1074 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 PTGES3Q15185 160 aaKnown RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 UPP1Q16831 310 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 VARS2Q5ST30 1063 aaKnown RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 ALKAL1Q6UXT8 129 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 TPGS1Q6ZTW0 290 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 MSANTD1Q6ZTZ1 278 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 LRRTM3Q86VH5 581 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 DNAJA4Q8WW22 397 aaPredicted RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 RHBDF1Q96CC6 855 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 CCDC120Q96HB5 630 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 RIPOR3Q96MK2 946 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 QRFPRQ96P65 431 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 SMIM14Q96QK8 99 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 SPATA9Q9BWV2 254 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 CHIAQ9BZP6 476 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 DPAGT1Q9H3H5 408 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 CARS2Q9HA77 564 aaKnown RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 PRDM5Q9NQX1 630 aaPredicted RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 PLSCR3Q9NRY6 295 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 SLC25A37Q9NYZ2 338 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 TMEFF2Q9UIK5 374 aaPredicted RBP7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 SLC25A13Q9UJS0 675 aa7.38□□□□□ -1.23
COL6A4P1-202ENST00000487147 GSAPA4D1B5 854 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 OR2AG2A6NM03 316 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 GFRA2O00451 464 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 CAPN5O15484 640 aaPredicted RBP7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 GPR39O43194 453 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 KDELR3O43731 214 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 AKAP8O43823 692 aaKnown RBP7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 RAB36O95755 333 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 C6orf47O95873 294 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 ALDH1A1P00352 501 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 F2P00734 622 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 GBAP04062 536 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 IFNA16P05015 189 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 ANXA3P12429 323 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 ETFAP13804 333 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 TACR1P25103 407 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 ETV3P41162 512 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 PIK3CBP42338 1070 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 AP1S2P56377 157 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 SELENOWP63302 87 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 HSF2Q03933 536 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 SLAMF1Q13291 335 aa7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 SETMARQ53H47 684 aaPredicted RBP7.37□□□□□ -1.23
COL6A4P1-202ENST00000487147 UBXN11Q5T124 520 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms