RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 RPL10P27635 214 aaKnown RBP15.86■□□□□ 0.13
COL7A1-210ENST00000487017 OR4D2P58180 307 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 SPERTQ8NA61 448 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 INO80EQ8NBZ0 244 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-210ENST00000487017 ZNF461Q8TAF7 563 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 HIST1H2AAQ96QV6 131 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 TBL1XR1Q9BZK7 514 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 TRPV4Q9HBA0 871 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 TIGARQ9NQ88 270 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 FAM118AQ9NWS6 357 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 MARCH4Q9P2E8 410 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-210ENST00000487017 PLAGL1Q9UM63 463 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 ERVK-11Q9UQG0 969 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 C8orf89P0DMQ9 161 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 GKP32189 559 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 RPP38P78345 283 aaKnown RBP15.86■□□□□ 0.13
COL7A1-210ENST00000487017 SOX4Q06945 474 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-210ENST00000487017 GRSF1Q12849 480 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL7A1-210ENST00000487017 LASP1Q14847 261 aaKnown RBP15.86■□□□□ 0.13
COL7A1-210ENST00000487017 ABRAXAS2Q15018 415 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 LCN8Q6JVE9 175 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 IGSF8Q969P0 613 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 IL12RB2Q99665 862 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 C16orf70Q9BSU1 422 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 MAGIXQ9H6Y5 334 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 ENAMQ9NRM1 1142 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 MYH6P13533 1939 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 GMPRP36959 345 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 FNDC8Q8TC99 324 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 C11orf84Q9BUA3 381 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-210ENST00000487017 SPATA9Q9BWV2 254 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 PNO1Q9NRX1 252 aaKnown RBP15.86■□□□□ 0.13
COL7A1-210ENST00000487017 FKBP14Q9NWM8 211 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 INSL5Q9Y5Q6 135 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 KDM4BO94953 1096 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 CYB5AP00167 134 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 MT-ND5P03915 603 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 TYRP14679 529 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 HNF1BP35680 557 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 SPRED3Q2MJR0 410 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 RAB6CQ53S08 254 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 C6orf183Q5T699 404 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 KBTBD6Q86V97 674 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 RAB8BQ92930 207 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 PIP5K1AQ99755 562 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 RAB6CQ9H0N0 254 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 SLC19A2O60779 497 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 HSD17B1P14061 328 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 STT3AP46977 705 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 ALG1LQ6GMV1 187 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 CELF5Q8N6W0 485 aaKnown RBP15.86■□□□□ 0.13
COL7A1-210ENST00000487017 BPIFB1Q8TDL5 484 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 TDP1Q9NUW8 608 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 EBF1Q9UH73 591 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 GNG8Q9UK08 70 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 LRP6O75581 1613 aa15.86■□□□□ 0.13
COL7A1-210ENST00000487017 SMIM30A4D0T7 59 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 PGAM2P15259 253 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 MYF6P23409 242 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 RAB8AP61006 207 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 TMEM115Q12893 351 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-210ENST00000487017 GINS1Q14691 196 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 CTC1Q2NKJ3 1217 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 CYP27C1Q4G0S4 372 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 PAQR7Q86WK9 346 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 SCML4Q8N228 414 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 L3HYPDHQ96EM0 354 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 TM9SF2Q99805 663 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 HAPLN2Q9GZV7 340 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 C2orf92A0A1B0GVN3 265 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 DHRS4L1P0CG22 281 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 EXOC3L2Q2M3D2 409 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 KLHL26Q53HC5 615 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 DGLUCYQ7Z3D6 616 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 BBS10Q8TAM1 723 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 TAS2R9Q9NYW1 312 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 DNAJC15Q9Y5T4 150 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 CLCA3PQ9Y6N3 262 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 ZSCAN5BA6NJL1 495 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 FAAHO00519 579 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 COCHO43405 550 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 MT-ND2P03891 347 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 KDELR2P33947 212 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 CHAF1BQ13112 559 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 OR4D1Q15615 310 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 EPYCQ99645 322 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 POLMQ9NP87 494 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-210ENST00000487017 MLXQ9UH92 298 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 TMEM98Q9Y2Y6 226 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 PENKP01210 267 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-210ENST00000487017 ACRP10323 421 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 GDI2P50395 445 aaKnown RBP15.85■□□□□ 0.13
COL7A1-210ENST00000487017 PRMT2P55345 433 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 FADDQ13158 208 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 ZNF227Q86WZ6 799 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 TMEM17Q86X19 198 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 TRUB1Q8WWH5 349 aaKnown RBP15.85■□□□□ 0.13
COL7A1-210ENST00000487017 MOAP1Q96BY2 351 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 ZNF778Q96MU6 729 aa15.85■□□□□ 0.13
COL7A1-210ENST00000487017 MAFFQ9ULX9 164 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms