RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ZNF324BQ6AW86 544 aaPredicted RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 HIST2H2AA3Q6FI13 130 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 CAPN12Q6ZSI9 719 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 LRRC70Q7Z2Q7 622 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 TBC1D1Q86TI0 1168 aaPredicted RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 CUZD1Q86UP6 607 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 CCDC25Q86WR0 208 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 LAS2Q8IYD9 372 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 PRSS58Q8IYP2 241 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 CENPLQ8N0S6 344 aaPredicted RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 LGI4Q8N135 537 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 SPATA6LQ8N4H0 392 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 CEP112Q8N8E3 955 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 EIF1ADQ8N9N8 165 aaKnown RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 DNAJB8Q8NHS0 232 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 ELP5Q8TE02 316 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 ADAMTS18Q8TE60 1221 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 UBTD2Q8WUN7 234 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 FAR1Q8WVX9 515 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 SLC44A1Q8WWI5 657 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 UBE2E3Q969T4 207 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 GAL3ST3Q96A11 431 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 MS4A6EQ96DS6 147 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 ZNF354BQ96LW1 612 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 QRFPRQ96P65 431 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 GPR78Q96P69 363 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 MESP1Q9BRJ9 268 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 ROGDIQ9GZN7 287 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 AICDAQ9GZX7 198 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 ILKAPQ9H0C8 392 aaPredicted RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 KLHL31Q9H511 634 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 MMP25Q9NPA2 562 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 AGPAT4Q9NRZ5 378 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 IGSF5Q9NSI5 407 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 STMN3Q9NZ72 180 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 NINJ2Q9NZG7 142 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 NUDT4Q9NZJ9 180 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 CD274Q9NZQ7 290 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 TEKT2Q9UIF3 430 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 ZNF180Q9UJW8 692 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 RNF112Q9ULX5 631 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 PPT2Q9UMR5 302 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 PPIEQ9UNP9 301 aaKnown RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 MMACHCQ9Y4U1 282 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 DOPEY1Q5JWR5 2465 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 IGKV3D-11A0A0A0MRZ8 115 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 TRAV17A0A0B4J275 112 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 TCRBV16S1A1N1A0A5B0 115 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 ESYT3A0FGR9 886 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 BLACEA4D250 179 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 TCP11X1B4DZS4 312 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 PYCARD-AS1I3L0S3 204 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 K7EPI3 171 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 FFAR3O14843 346 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 GPR42O15529 346 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 PRMT3O60678 531 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 UGDHO60701 494 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 DNAJB6O75190 326 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 RDH16O75452 317 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 DDAH2O95865 285 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 ALDOAP04075 364 aaKnown RBP6.58□□□□□ -1.36
VPS50-218ENST00000485994 RBP1P09455 135 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 ITGAMP11215 1152 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 EPORP19235 508 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 TYK2P29597 1187 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 ECHS1P30084 290 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 HNF4AP41235 474 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 GLRBP48167 497 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 HSPA7P48741 367 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 ALDH18A1P54886 795 aaKnown RBP6.58□□□□□ -1.36
VPS50-218ENST00000485994 HSD17B7P56937 341 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 ACTN3Q08043 901 aaPredicted RBP6.58□□□□□ -1.36
VPS50-218ENST00000485994 RAPSNQ13702 412 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 RUNX2Q13950 521 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 NAA30Q147X3 362 aaPredicted RBP6.58□□□□□ -1.36
VPS50-218ENST00000485994 PDK4Q16654 411 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 MEP1AQ16819 746 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 C18orf21Q32NC0 220 aaPredicted RBP6.58□□□□□ -1.36
VPS50-218ENST00000485994 TMEM35AQ53FP2 167 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 DEPDC1Q5TB30 811 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 MROH9Q5TGP6 573 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 ABHD17CQ6PCB6 329 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 TIFABQ6ZNK6 161 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 RAPH1Q70E73 1250 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 CMC1Q7Z7K0 106 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 TMPRSS11BQ86T26 416 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 ZNF595Q8IYB9 648 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 CA13Q8N1Q1 262 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 CISD2Q8N5K1 135 aaKnown RBP6.58□□□□□ -1.36
VPS50-218ENST00000485994 NOA1Q8NC60 698 aaKnown RBP6.58□□□□□ -1.36
VPS50-218ENST00000485994 ST6GALNAC3Q8NDV1 305 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 OR2L5Q8NG80 312 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 BRIX1Q8TDN6 353 aaKnown RBP6.58□□□□□ -1.36
VPS50-218ENST00000485994 NXNL1Q96CM4 212 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 ITPKCQ96DU7 683 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 PEX11GQ96HA9 241 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 FAR2Q96K12 515 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 TSNARE1Q96NA8 513 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 PTCHD1Q96NR3 888 aa6.58□□□□□ -1.36
VPS50-218ENST00000485994 PSMG3-AS1Q96PY0 264 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms