RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SMPDL3AQ92484 453 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 CCM2Q9BSQ5 444 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 PAPOLGQ9BWT3 736 aaKnown RBP4.8□□□□□ -1.64
SF3B1-210ENST00000482158 WWTR1Q9GZV5 400 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 ZDHHC18Q9NUE0 388 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 TRPC4Q9UBN4 977 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 DBF4Q9UBU7 674 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-210ENST00000482158 PSORS1C1Q9UIG5 152 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 PLCL2Q9UPR0 1127 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 IGLV7-46A0A075B6I9 117 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 ANHXE9PGG2 379 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 K7EQD1 137 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 SIGLEC5O15389 551 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 ARHGEF9O43307 516 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 CLN5O75503 358 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 NXPH4O95158 308 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 SLC1A3P43003 542 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 UCP2P55851 309 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 STXBP2Q15833 593 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 ZNF497Q6ZNH5 498 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 MSANTD4Q8NCY6 345 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 LPCAT1Q8NF37 534 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 NUP37Q8NFH4 326 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 CHURC1Q8WUH1 139 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 GGHQ92820 318 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 SYT11Q9BT88 431 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 FGFBP2Q9BYJ0 223 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 MAGEF1Q9HAY2 307 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 MID1IP1Q9NPA3 183 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 DNAJC11Q9NVH1 559 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 LNPEPQ9UIQ6 1025 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 PILRAQ9UKJ1 303 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 FBXW2Q9UKT8 454 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 ITM2BQ9Y287 266 aa4.79□□□□□ -1.64
SF3B1-210ENST00000482158 IGHV3-20A0A0C4DH32 117 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 C2orf92A0A1B0GVN3 265 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 HMOX1P09601 288 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 SBK2P0C263 348 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 VDRP11473 427 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 PDHA2P29803 388 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 HNF4AP41235 474 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 BACE1P56817 501 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 HUNKP57058 714 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 EVCP57679 992 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 CALCOCO2Q13137 446 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 NECTIN1Q15223 517 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 HFEQ30201 348 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 ZNF613Q6PF04 617 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 ZER1Q7Z7L7 766 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 TMEM126BQ8IUX1 230 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 CNTN4Q8IWV2 1026 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 SLC43A2Q8N370 569 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 CLEC1AQ8NC01 280 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 RNF149Q8NC42 400 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 PRSS33Q8NF86 280 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 RPLP0P6Q8NHW5 317 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 ATP8B4Q8TF62 1192 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 SNX21Q969T3 373 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 MOCOSQ96EN8 888 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 LINC00479Q96M42 142 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 GFRA4Q9GZZ7 299 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 MTIF3Q9H2K0 278 aaKnown RBP4.78□□□□□ -1.64
SF3B1-210ENST00000482158 AKIRIN1Q9H9L7 192 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-210ENST00000482158 ERRFI1Q9UJM3 462 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-210ENST00000482158 ETV7Q9Y603 341 aa4.78□□□□□ -1.64
SF3B1-210ENST00000482158 RNF123Q5XPI4 1314 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 TMEM129A0AVI4 362 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 SYT7O43581 403 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 NUDT17P0C025 328 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 SKILP12757 684 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 ACKR3P25106 362 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 GIFP27352 417 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 GPR183P32249 361 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 LUMP51884 338 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-210ENST00000482158 DHODHQ02127 395 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 PPP2R5CQ13362 524 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 FCN2Q15485 313 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 MTHFSDQ2M296 383 aaKnown RBP4.77□□□□□ -1.65
SF3B1-210ENST00000482158 MOGAT2Q3SYC2 334 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 FASTKD1Q53R41 847 aaKnown RBP4.77□□□□□ -1.65
SF3B1-210ENST00000482158 GSG1LQ6UXU4 331 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 C3P1Q6ZMU1 363 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 AQP11Q8NBQ7 271 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 SPC24Q8NBT2 197 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 OR5M9Q8NGP3 310 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 OR13C5Q8NGS8 318 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 C5orf30Q96GV9 206 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 ATXN7L3BQ96GX2 97 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 DDX50Q9BQ39 737 aaKnown RBP4.77□□□□□ -1.65
SF3B1-210ENST00000482158 MRPL9Q9BYD2 267 aaKnown RBP4.77□□□□□ -1.65
SF3B1-210ENST00000482158 VPS33BQ9H267 617 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 ZNF665Q9H7R5 613 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 B3GAT2Q9NPZ5 323 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 THEGQ9P2T0 379 aa4.77□□□□□ -1.65
SF3B1-210ENST00000482158 MRPS18CQ9Y3D5 142 aaKnown RBP4.77□□□□□ -1.65
SF3B1-210ENST00000482158 LOC105371242A0A075B767 164 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 ATP6AP2A0A1C7CYW4 349 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 A8MU76 341 aa4.76□□□□□ -1.65
SF3B1-210ENST00000482158 CACNB4O00305 520 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-210ENST00000482158 STBD1O95210 358 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms