RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 GAL3ST3Q96A11 431 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 MS4A6EQ96DS6 147 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 CCDC120Q96HB5 630 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 CLK4Q9HAZ1 481 aaKnown RBP17.37■□□□□ 0.37
CLK1-211ENST00000481641 WWOXQ9NZC7 414 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 WHRNQ9P202 907 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 PCDHGB6Q9Y5F9 930 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 TCRBV9S1A1TA0A576 114 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 LRIT2A6NDA9 550 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 PRSS44E7EML9 344 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 NPIPA5E9PKD4 350 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 TGFBR3LH3BV60 316 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 ERI3O43414 337 aaKnown RBP17.36■□□□□ 0.37
CLK1-211ENST00000481641 FAM155BO75949 473 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 TBX6O95947 436 aaPredicted RBP17.36■□□□□ 0.37
CLK1-211ENST00000481641 C1QAP02745 245 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 CD1DP15813 335 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 GRNP28799 593 aaKnown RBP17.36■□□□□ 0.37
CLK1-211ENST00000481641 PPP2R1BP30154 601 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 CA7P43166 264 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 PLA2G16P53816 162 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 MLF1P58340 268 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 STXBP1P61764 594 aaKnown RBP17.36■□□□□ 0.37
CLK1-211ENST00000481641 ALDH6A1Q02252 535 aaKnown RBP17.36■□□□□ 0.37
CLK1-211ENST00000481641 TRADDQ15628 312 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 C3AR1Q16581 482 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 MAPKAPK3Q16644 382 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 C3orf62Q6ZUJ4 267 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 ZNF227Q86WZ6 799 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 GPSM1Q86YR5 675 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 C17orf53Q8N3J3 647 aaPredicted RBP17.36■□□□□ 0.37
CLK1-211ENST00000481641 SNX31Q8N9S9 440 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 THAP3Q8WTV1 239 aaPredicted RBP17.36■□□□□ 0.37
CLK1-211ENST00000481641 ITLN2Q8WWU7 325 aaPredicted RBP17.36■□□□□ 0.37
CLK1-211ENST00000481641 EXT2Q93063 718 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 FAR2Q96K12 515 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 FRMD6Q96NE9 622 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 GPR22Q99680 433 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 RBBP8Q99708 897 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 PNO1Q9NRX1 252 aaKnown RBP17.36■□□□□ 0.37
CLK1-211ENST00000481641 DNAJC11Q9NVH1 559 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 TXNDC16Q9P2K2 825 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 ZNF490Q9ULM2 529 aaPredicted RBP17.36■□□□□ 0.37
CLK1-211ENST00000481641 NPIPA1Q9UND3 350 aa17.36■□□□□ 0.37
CLK1-211ENST00000481641 MYO9AB2RTY4 2548 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 MYOCOSA0A1B0GUC4 107 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 ASPDHA6ND91 283 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 FAM159BA6NKW6 160 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 KCNC1P48547 511 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 RBPJQ06330 500 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 LGI4Q8N135 537 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 KRT78Q8N1N4 520 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 FAM47BQ8NA70 645 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 TMEM178AQ8NBL3 297 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 CDKL2Q92772 493 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 TSPAN17Q96FV3 270 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 GPR137Q96N19 417 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 QRFPRQ96P65 431 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 CPNE1Q99829 537 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 DEFB126Q9BYW3 111 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 CD274Q9NZQ7 290 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 SUCOQ9UBS9 1254 aaKnown RBP17.35■□□□□ 0.37
CLK1-211ENST00000481641 TINAGQ9UJW2 476 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 ASB1Q9Y576 335 aa17.35■□□□□ 0.37
CLK1-211ENST00000481641 LRBAP50851 2863 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 TRBV11-1A0A0K0K1C0 115 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 ANKDD1BA6NHY2 528 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 CLGNO14967 610 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 EIF3HO15372 352 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLK1-211ENST00000481641 SLC19A2O60779 497 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 SLC25A12O75746 678 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 MYO1DO94832 1006 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 PRF1P14222 555 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 STMN1P16949 149 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 CD22P20273 847 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 GGT5P36269 586 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 GP5P40197 560 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 PLTPP55058 493 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 DOC2AQ14183 400 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 XKR6Q5GH73 641 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 RNFT1Q5M7Z0 435 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 SULT1C3Q6IMI6 304 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 MAATS1Q7Z4T9 603 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 CLNKQ7Z7G1 428 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 MRGPRGQ86SM5 289 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 CCDC25Q86WR0 208 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 SCUBE1Q8IWY4 988 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 CTAGE3PQ8IX95 158 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 HORMAD2Q8N7B1 307 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 APCDD1LQ8NCL9 501 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 ARMC2Q8NEN0 867 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 TTLQ8NG68 377 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 ANP32BQ92688 251 aaKnown RBP17.34■□□□□ 0.37
CLK1-211ENST00000481641 MARVELD3Q96A59 401 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 NT5DC2Q9H857 520 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 PRTFDC1Q9NRG1 225 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 GPRC5BQ9NZH0 403 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 ZNF223Q9UK11 482 aaPredicted RBP17.34■□□□□ 0.37
CLK1-211ENST00000481641 ENTPD4Q9Y227 616 aa17.34■□□□□ 0.37
CLK1-211ENST00000481641 MMACHCQ9Y4U1 282 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms